Flagellimonas sp. MMG031: ABNE31_05360
Help
Entry
ABNE31_05360 CDS
T10636
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fld Flagellimonas sp. MMG031
Pathway
fld02020
Two-component system
fld02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fld00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNE31_05360 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABNE31_05360 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fld03021
]
ABNE31_05360 (rpoN)
Transcription machinery [BR:
fld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNE31_05360 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
CEP76_N
LacI
SPT2_N
HTH_12
GMP_synt_C
HTH_IclR
Mga
Motif
Other DBs
NCBI-ProteinID:
XBQ24347
UniProt:
A0AAU7N3H5
LinkDB
All DBs
Position
complement(1195856..1197313)
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGKEETDTLDDMY
EDTYDESEDHENIDTEEINIDDYLSDDEIPDYRTQANNYSADDEDKRVPYAAGTSFTQYL
LNQLNTVYLDDEEWAIAEFLVGSVDESGYIRRPLTDIMDDLAFTQNIYVEEDKIKKVLGI
VQDLDPPGVAARSLDECLIIQLKRKEPKPSIELAINILERSFEHFTKKHYTKLIQKHHVS
EEELKEAISEIEKLNPKPGGSYSGNTRMIEHIVPDFSIKIVDGELELTLNGRNAPELHVS
KEYSNMLEGYKNAKEKSKSQKDTVMFIKQKLDAAKWFIDAIRQRQQTLYITMNTIMEYQK
EYFMTGDERKLRPMILKDIADRIDMDVSTVSRVANSKYVDTPYGTKLIKDFFSEAMKNEQ
GEDVSTKEIKKILETVIRDEEKKKPLTDAKLAKILKERGYPIARRTVAKYREQLGIPVAR
LRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcaacatctacagtttaaactttcccaaaaactgtctccgcagcagattcag
ctcatgaaactgattcaattgcccacgcaggcctttgaacagcgattgaagcaagagctg
gaggaaaatcctgcattggagagcggcaaagaggaaacggataccttggatgatatgtac
gaggatacgtatgatgaatcggaggaccatgaaaacatcgacaccgaggaaatcaacata
gacgattacctcagtgatgatgaaatccccgattaccgcacccaagccaacaattacagt
gcggacgacgaggacaaacgggtcccctacgcggcgggaacatcctttacccaatatttg
ctcaaccagctcaataccgtctatctggatgatgaagaatgggccatagctgagtttttg
gtgggcagcgtggatgaaagtggctatatccgcagacccttgacggacattatggacgat
ttggccttcacccagaacatatatgtggaagaggacaagatcaaaaaggtgcttggtatt
gtacaagatctcgacccccctggtgtggctgcccgttcattggacgaatgtttgatcatc
cagctcaaacgcaaagagccaaaaccttcaatagaattggccattaatatcctagaacgg
tcttttgaacattttaccaagaaacattataccaagctcatccagaaacatcacgtttcc
gaagaagagcttaaggaggccatttcggaaattgaaaaattgaatcccaagccaggaggc
tcctactcgggaaatacccggatgatagagcacatagtgcccgatttttccattaaaatc
gtggacggggaactggaactgaccctaaatggcagaaatgcaccggagcttcatgtatcc
aaagaatacagtaacatgctcgaagggtataaaaatgccaaggaaaagtccaagtcccaa
aaggatacggtcatgttcatcaaacaaaagctggatgcggccaaatggttcattgatgcc
attcgccagcgacagcaaaccttgtacattaccatgaataccatcatggaatatcaaaag
gaatattttatgaccggggacgagcggaaactgcgccccatgatcttgaaggatattgcc
gataggattgacatggatgtttccacggtgtcgcgagtggcaaacagcaaatatgtggac
actccctacggcaccaaattgatcaaggatttcttctccgaggcaatgaaaaatgagcag
ggcgaagatgtatcgaccaaagaaatcaaaaaaatcctggaaaccgttatccgtgatgag
gaaaagaaaaagcccctcaccgatgcaaagctcgccaaaatcctaaaggaaaggggatat
ccgattgcccggcgaacggtcgccaaatatcgggaacagttgggcattccggtggcccga
ctacgaaaagagatttaa
DBGET
integrated database retrieval system
