Flagellimonas sp. MMG031: ABNE31_07820
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Entry
ABNE31_07820 CDS
T10636
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fld Flagellimonas sp. MMG031
Brite
KEGG Orthology (KO) [BR:
fld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fld03009
]
ABNE31_07820 (rlmD)
Enzymes [BR:
fld01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ABNE31_07820 (rlmD)
Ribosome biogenesis [BR:
fld03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABNE31_07820 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
Methyltransf_11
TRAM
PCMT
PrmA
UPF0020
N6_N4_Mtase
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
XBQ24806
UniProt:
A0AAU7N246
LinkDB
All DBs
Position
complement(1736650..1738062)
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AA seq
470 aa
AA seq
DB search
MRKNRRRKTFENVTVVDAGAKGKSVGKAPDGRVIFLSNAVPGDVVDVMTTKKRKAYFEGV
ATKFHTLSDKRTEPVCQHFGTCGGCKWQHMGYEHQLYFKQKEVENNLKRIGNLELPTTQP
ILGSKEQYFYRNKMEFSFSDSRWLTQKEIDSHKDIEDRNALGFHIPGMWDKILDIKKCHL
QEDPSNAIRLETKQFANKNGLRFFNPRKQEGLLRTLMIRTSSTGEIMVLIQFFEEHKEQR
ELLLDHLKDTFPEITSLLYVVNSKANDTIYDQEIICFAGRDHIFEEMEGLQFKINAKSFY
QTNSAQAYELYKVTRDFAGLTGNELVYDLYTGTGTIAQFVAKDAKKVVGVESVPEAIADA
KANAVHNQISNVEFFVGDMKNVFNDDFIAAHGQPDVIITDPPRDGMHKQVVEQLLQVGPP
KIVYVSCNSATQARDLALMKEQYQVVKVQPVDMFPQTHHVENVVLLEKRV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaaacagaaggagaaaaacgtttgaaaacgtcaccgtggtagatgcgggagca
aagggaaaatccgtgggaaaagcaccagatggacgagtaattttcctcagtaatgccgta
cccggtgatgtggtggacgtaatgaccaccaaaaaacgaaaagcctattttgaaggcgtt
gccaccaaattccataccctgtccgacaaacggacggaacccgtttgccagcactttggt
acttgtgggggctgcaagtggcagcacatgggctatgagcaccaactctattttaaacaa
aaagaggtggaaaataacctgaagcgcatcggtaacttggaattacccacgacccaaccc
attttgggttccaaggaacaatatttctaccgaaacaaaatggagttttcgttttctgac
agtcgatggttaacacaaaaagaaatcgactcccacaaagatattgaggacagaaatgcc
cttggattccatattccagggatgtgggacaagattctggacatcaaaaaatgtcactta
caggaagacccctccaatgctatccgtttggaaacgaaacagtttgccaacaagaacggg
ctgcgctttttcaatccaagaaaacaggaagggctactaaggactttgatgattcgtacc
tcctccactggcgaaattatggtgctcatccaattctttgaagagcataaggagcaacga
gaactgttgctggaccatttgaaggatacctttccggaaatcacttccttgctatatgtt
gtcaattccaaggccaacgataccatttatgaccaagagataatctgctttgcaggacgc
gaccatattttcgaggaaatggagggcttacagttcaaaatcaatgcgaaatccttctac
cagaccaattcagcccaagcctacgaactttacaaagtaaccagggattttgccgggctt
acgggaaatgagctggtgtatgatctatacacaggaacaggcaccattgcccagtttgtc
gcgaaagatgccaagaaggtagtcggtgttgaatccgttccagaagcgattgccgatgca
aaggccaatgcggtgcacaaccaaatttccaatgtagaattttttgttggcgatatgaag
aatgtatttaatgatgattttattgctgcccacggccaaccagatgttattatcaccgac
ccgccaagggatggtatgcacaaacaggtggtagagcagttattgcaagtgggaccacca
aagattgtttatgtaagctgtaacagtgccacacaagcaagggacttggcattgatgaaa
gaacaatatcaagttgtcaaagtgcagccggtggatatgttcccccagacccaccacgtt
gaaaatgttgtacttttggaaaaacgggtctag
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