Flagellimonas sp. MMG031: ABNE31_10340
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Entry
ABNE31_10340 CDS
T10636
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fld Flagellimonas sp. MMG031
Pathway
fld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABNE31_10340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fld03019
]
ABNE31_10340
03400 DNA repair and recombination proteins [BR:
fld03400
]
ABNE31_10340
Enzymes [BR:
fld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABNE31_10340
Messenger RNA biogenesis [BR:
fld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABNE31_10340
DNA repair and recombination proteins [BR:
fld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABNE31_10340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
wHTH-PRTase_assc
Swi5
HTH_5
NirdL-like_HTH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XBQ21996
UniProt:
A0AAU7MTU0
LinkDB
All DBs
Position
complement(2300234..2302126)
Genome browser
AA seq
630 aa
AA seq
DB search
MHKNITSVLQQYWGYDDFRGSQRKIIDTVISGQDVLALMPTGGGKSICYQVPALAMEGIC
VVVSPLVALIQDQVAQLKKRNIKAIALTGGIRSNEVNDLLDNCVFGNYKFLYLSPERLQQ
TVVRERIQQMNVNLIAIDEAHCISQWGNDFRPAYLECSILKELAPQTPMIALTATATPRV
VDDIVENLELKEVRIFKDSFSRSNIAFKVRRSEDKLYQLKKYMEKIPGSGIVYVRSRKMS
ISLANFLINNGVSAPFYHGGIPKSDKEEKLNRWLNGKDRVMVATNAFGMGVDKPDVRLVI
HYQIPDSLESYFQEAGRAGRDGEPSTAIILTSKEDADRAKQQFLSTLPDVGFVKTVYSKL
NNYFQISYGELISEPQAFKFNEFCSRYAFNPNMAFNALRILDQNSVLSLAENFKEKTTLQ
FVASKAEIFNYLDKNRKTAPIIQTILRTYGGITDYETKINLYMLSQKTGTGEERLKQLLQ
QLADDNIAEYYNHSSDLEITFLVPREDDHTINPFAKKIKDFNQVKVDNMAAMLGYIANQK
RCRSVYLLNYFGEKSAEKCGTCDICTKKAKVSPPHDLEQKILELLEIRPHSSRQLERVTG
TSEKELLNLLERLLENGLVSINIKNEYIKT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaagaacatcacaagcgttttacaacagtactggggatatgatgattttaggggt
tcccagaggaaaatcattgatacggtcatttctgggcaagatgtactcgccctgatgcct
accggtggcggaaaatccatttgttaccaagtgcccgcactggccatggaaggtatttgt
gttgtggtctcacctttggtggccctgatccaagatcaggtggcccaattaaaaaagaga
aatatcaaggcaatcgccttaaccgggggcatccgttccaacgaagtaaacgacttgttg
gacaattgtgtatttggcaactacaaattcctgtacctatccccagaacgcttacagcag
accgtggtaagggaacgcattcagcaaatgaacgttaatcttattgcgattgacgaggca
cattgtatctcccagtggggaaacgactttaggcctgcttatttggaatgctctatttta
aaggaattggctcctcaaactccaatgattgcacttacggcgacagctacgcctcgtgtt
gtggatgacatcgttgagaatttggaactgaaggaggtccgtatttttaaggattccttt
tcccgttccaatatcgctttcaaggtaaggcgttcggaggacaaattgtaccagctcaaa
aaatacatggaaaaaatcccgggaagcggcatcgtctatgtacgttcccggaaaatgtcc
atatccttggccaactttttgatcaacaacggggtatcggctcctttttaccatgggggc
attcccaaatcggacaaggaggaaaaactcaatcgttggttgaatggcaaagacagggtc
atggtggccaccaatgcctttggcatgggggtggataaaccagatgtgcgtttggtcatc
cattaccagatacccgacagtttggaaagctattttcaggaggcgggacgtgctggtagg
gatggagagccttcaacggccatcatcctaacctccaaagaagatgcggatagggccaaa
cagcagtttttgtccaccctgcccgatgtgggttttgtgaaaaccgtttattccaagctc
aacaactattttcagatttcctacggagagcttatttcggaaccccaggccttcaagttc
aatgagttttgttcacgatatgcgtttaatcccaacatggcgttcaatgcccttcgtatt
ttagatcaaaattccgtgctatcgttggccgaaaactttaaggagaaaactacgcttcaa
tttgtagcttccaaggccgaaatattcaattacttggacaaaaaccgcaaaacggctccc
atcattcaaaccattttacggacctacggaggtattacggattatgagaccaagatcaat
ctgtatatgctgtcccaaaaaacgggcacgggcgaagaacgtttaaaacaattattacag
caactggcggacgataacattgcggaatactacaaccatagttccgatttggaaattacc
tttttagtgccccgtgaagacgaccataccatcaacccgtttgccaaaaaaataaaggat
ttcaaccaagtgaaggtggataatatggccgctatgttggggtacattgccaatcagaaa
aggtgccgtagtgtttacctactgaattattttggcgaaaagtccgccgaaaagtgcggc
acttgcgatatttgcacaaagaaggccaaagtatcccctccacacgacttggaacaaaaa
attctggaactcttggaaattcgcccccattcctccagacagttggaacgcgtcacggga
acaagtgaaaaagaacttttgaacctgctcgagcggttgctggaaaatggattggtctcg
ataaacattaagaatgagtacatcaaaacataa
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