Flagellimonas sp. MMG031: ABNE31_11445
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Entry
ABNE31_11445 CDS
T10636
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
fld Flagellimonas sp. MMG031
Pathway
fld02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fld00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABNE31_11445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fld03021
]
ABNE31_11445
Transcription machinery [BR:
fld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNE31_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
UCR_14kD
HTH_20
LexA_DNA_bind
UPF0122
Motif
Other DBs
NCBI-ProteinID:
XBQ22213
UniProt:
A0AAU7MUY1
LinkDB
All DBs
Position
2529638..2530498
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AA seq
286 aa
AA seq
DB search
MRQLKITKQITTRDTKSLEKYFQEISKIELITADEEVELARRIREGDQAALTKLVNANLR
FVVSTAKQYQGSGLRLSDLINEGNIGLVKAAKRFDETRGFKFISYAVWWIRQSILQAISQ
NSRMVRLPLNKIGEISKIKKVFSALEQTHQRPPSAAEIAKELDMTSAKVKLAMKNSARHL
SMDAPFKQGESGNLYHVVASKDSMRPDDKMIQDSLSADIDQALKTLPERESEIIRLHYGL
GERSPKSLSEIGELFDITRERVRQIREKAIRMLRRRSHNEILQAYL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactaaagattaccaaacaaattacaaccagggataccaaatcattagaaaag
tattttcaagaaatctccaaaattgaattgatcactgcggacgaggaagtagaactggca
agaagaattcgtgaaggtgatcaagctgcccttaccaaattggtcaatgcgaatctacgt
tttgtcgtatctaccgcaaaacaataccagggaagcggcttacggctctccgacttgatc
aatgaagggaacataggtttggtaaaagctgccaaacgctttgatgaaactaggggtttt
aaatttatctcctatgcggtttggtggatcagacaatccatattacaggccatttcacaa
aactcccgtatggtccggttgccgctcaataaaattggtgaaataagtaaaataaagaaa
gtcttttcggccttggaacaaacccaccaaaggcctcccagcgctgccgaaatagcaaaa
gagctcgatatgacttctgctaaagtgaaattggccatgaaaaactccgcaagacacctg
tccatggatgcgccttttaagcaaggtgaatccggcaacctttaccatgtggtcgcatca
aaagacagtatgcgccccgacgataaaatgattcaggattccttgagtgccgatattgac
caagctttaaagaccctcccggagcgtgaaagcgaaattatacgtcttcattatggtctt
ggtgaacgaagcccaaaaagtttaagtgagataggtgaactatttgatatcactagggaa
cgcgtacgacaaattagggaaaaagccatccgaatgttgcgaagacgttcgcacaacgag
attttacaagcatacctttaa
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