Ferribacterium limneticum: KI610_00015
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Entry
KI610_00015 CDS
T07599
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fle
Ferribacterium limneticum
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fle03032
]
KI610_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
fle03400
]
KI610_00015 (gyrB)
Enzymes [BR:
fle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KI610_00015 (gyrB)
DNA replication proteins [BR:
fle03032
]
Prokaryotic type
DNA Topoisomerases
KI610_00015 (gyrB)
DNA repair and recombination proteins [BR:
fle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KI610_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
FLYWCH_N
Motif
Other DBs
NCBI-ProteinID:
UCV19016
LinkDB
All DBs
Position
2782..5271
Genome browser
AA seq
829 aa
AA seq
DB search
MSEENVPQSESPAYGEASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEA
LAGHCDDIIVTIHTDNSISVIDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQN
SYKVSGGLHGVGVSCVNALSKFLRLTIRRDGKKHFMEFCRGVPVDRSIEVRDGFEVSPLK
VIGDTEKRGTEVHFLADDEIFGHVEFHYEILAKRLRELSFLNNGVSIKLVDQRAGKEELF
AFAGGVQSFVEYINRTKSVLHPNIFYSSGDAKVGQGAADSAITIGVEVAMQWNDSYQEQV
LCFTNNIPQSDGGTHLTGLRAAMTRVINKYIDENEIAKKAKVDIAGDDMREGLACVLSVK
MPDPKFASQTKMKLVSSEARAAVEEVVAQKLADFLLERPVDAKMICGKIVEASRAREAAR
RAREMTRRKGVLDGVGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPL
RGKVLNVEKARFDKLISSEQIVTLITALGTGIGKDDFNVEKLRYHRIIIMTDADVDGAHI
RTLLLTLLYRQMPELIDRGYVYIAQPPLYKVKHGKTERYLKDDLEYNQFLLNMALDEAVL
TPRVGAEPITGPALEGLARSWLATEAVIDRLSHLINPEVLQSIVRHNLAVDLSSEEKTRA
SAELIASFIPAGTRMVPKYDDIQERWTLRVERMHHGNLKVGLIDEDLLLSGDFMQLRRTA
ETLADMFGAGAIMARGEKKQVVTNFGDAMKWLLNEVERGIAKQRYKGLGEMNPSQLWETT
MDPKVRRLLRVQIDDAIAADEIFTTLMGEDVEPRRAFIETNALSARVDI
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagaacgtcccgcaatccgagtcgcccgcctacggcgaagccagtatccag
atcctcgaaggcctggaggccgtccgcaagcgcccgggcatgtacatcggcgatacctcc
gacggtaccggcctgcatcatctggtcttcgaagtcgtcgacaactcgatcgacgaagcg
ctggctgggcattgcgacgacatcatcgtcaccattcataccgacaactcgatttccgtc
atcgacaacggccggggcatcccgaccggcgtcaagatggatgacaagcacgagccgaag
cgctcggcagctgaaatcgcgctgaccgaactgcacgctggcggcaagttcaaccagaat
tcctacaaggtatcgggcggtctgcacggcgttggcgtgtcctgcgtcaatgcgctgtcc
aagttcctgcgcctgaccatccgccgcgatggcaagaagcatttcatggaattttgccgt
ggtgtgccggttgaccgcagcatcgaggtccgcgacggttttgaagtctcgccgctcaag
gtgatcggcgatactgaaaaacgcggtaccgaagtgcacttcctggccgatgacgaaatc
ttcggtcacgtcgaattccactacgaaatcctcgccaagcgcctgcgcgaactgtctttc
ctgaacaacggcgtatcgatcaaactggtcgaccagcgcgccggcaaggaagagcttttc
gcctttgccggtggcgtgcagagctttgttgagtacatcaaccgcaccaagtcggtcctc
catccaaacattttctattcgtccggcgacgccaaggtgggtcagggcgccgccgattcc
gccatcaccatcggcgtcgaagtggcgatgcagtggaacgactcctaccaggaacaggtg
ctctgctttaccaacaacattccgcaatcggacggtggcacccacctgactggtttgcgc
gccgcgatgacccgcgtcatcaacaagtacatcgacgaaaacgagatcgccaagaaggcc
aaggtcgacatcgccggtgacgacatgcgcgaaggcctggcctgcgtgctgtcggtcaag
atgcctgatccgaagttcgcctcgcagaccaagatgaagctggtctcgtcggaagcccgt
gctgccgttgaagaagttgtcgcccagaagctcgctgatttcctgcttgagcgtccggtc
gatgccaagatgatttgcggcaagatcgtcgaagcctcgcgggcccgtgaggccgctcgt
cgcgcccgtgaaatgacgcgccgcaagggcgttctcgacggcgttggcttgcccggcaag
ctcgctgactgtcaggaaaaagacccggcgctgtgcgaaatctacatcgtcgagggcgac
tccgctggcggctccgccaagcagggccgcgaccggaagttccaggccatcctgccgctg
cgcggcaaggtgctcaacgtcgagaaggcgcgtttcgacaagctgatctcgtccgaacag
atcgtcacgctgatcaccgcgctcggtaccggcatcggcaaggacgatttcaacgtcgag
aagttgcgctaccaccgcatcatcatcatgaccgacgcggacgtcgacggcgcgcacatc
cgcactctgctgctgacgctgctctatcgccagatgccggagctgatcgaccgcggctac
gtctacatcgcccagccgccgctctacaaggtcaagcatggcaagaccgagcgttacctc
aaggacgatctcgaatacaaccagttcctgctcaacatggcgctcgacgaagctgtcctg
acaccgcgtgtcggggccgagccgattaccggcccggcccttgaaggtctggcccgttcg
tggctggccaccgaagccgtcatcgatcgcctgtcgcacctgatcaatccggaagtgctg
cagtccatcgttcgtcacaatctggcggtcgacctgtcgagcgaagaaaaaacgcgggcc
agtgccgaactgatcgcttccttcatcccggctggcacgcgcatggtgccgaaatacgac
gacatccaggaacgctggaccctgcgcgtcgaacgcatgcaccacggcaacctcaaggtc
ggcctgatcgacgaagatctgctgctctccggcgatttcatgcagttgcgccgcacggcc
gaaacgctggctgatatgttcggcgccggcgccatcatggcgcgtggcgagaaaaaacag
gtcgtgaccaacttcggcgacgccatgaagtggttgctcaacgaagtcgaacgcggcatc
gccaagcagcgctacaaaggtctgggcgaaatgaacccgtcgcagctttgggaaacgacg
atggacccaaaagtccgccgcctgctgcgtgtgcagatcgacgatgccatcgccgccgac
gaaatcttcacgaccctcatgggcgaggatgtcgagccgcgtcgggccttcatcgaaacc
aacgccttgagcgcccgggtcgatatctga
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