Ferribacterium limneticum: KI610_00870
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Entry
KI610_00870 CDS
T07599
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fle
Ferribacterium limneticum
Pathway
fle03030
DNA replication
fle03410
Base excision repair
fle03420
Nucleotide excision repair
fle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI610_00870 (polA)
03410 Base excision repair
KI610_00870 (polA)
03420 Nucleotide excision repair
KI610_00870 (polA)
03440 Homologous recombination
KI610_00870 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fle03032
]
KI610_00870 (polA)
03400 DNA repair and recombination proteins [BR:
fle03400
]
KI610_00870 (polA)
Enzymes [BR:
fle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KI610_00870 (polA)
DNA replication proteins [BR:
fle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KI610_00870 (polA)
DNA repair and recombination proteins [BR:
fle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KI610_00870 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI610_00870 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UCV19180
LinkDB
All DBs
Position
complement(179021..181741)
Genome browser
AA seq
906 aa
AA seq
DB search
MPLLLLVDGSSYLYRAFHALPDLRNKAGEPTGAIYGVLNMLRRLESDYKADYKAVVFDAK
GKTFRDDWYPEYKAHRPPMPPEMVGQIEPLHAAIKAAGWPLLMVDGVEADDVIGTLATNA
AVDGINTLISTGDKDLTQLVNPLVRWYNTMSNELLDEAGVEAKFGVPPDKIVDYLALVGD
TVDGVPGVAKCGPKTALKWLAQYGSLDEIVAHADEIGGVVGQNLRDHLGFLPLGKKLVTV
ACDLTNLPAPATLNATAPDLATLRELYTRYQFRSWLADIDGPEAAADIPARTVSDAAAPA
LQGKIDVTYETVLSWPQFDAWLAKIEAAELTALDTETTSLDSFAARIVGISLSVKPGEAC
YIPLAHTAPGVADQLPRDEVLEKLKPWLSTVNRKKVLQNAKYDQHVFANHGITLAGIEHD
TMLQSYVIESDKGHDLGQLCTRHLGLDTIAYEDLCGKGAKQISFDQVDIERAAIYSAEDA
DVTLRVHNVLHPQFADEPGLSRIYHDIEMPARQVIWQIERNGILIDSDVLSRQSHEMGQK
IMALEAQAYELAGQPFNLASPKQLGDILFEKLGLPVKKKTPSGGPSTDEEVLSELALDYP
LPKLLLEHRSLSKLKGTYTDKLPRMVNTQTGRVHTHFSQASVVTGRLASTDPNLQNIPVR
SEEGRKIRTAFIAPEGSSIVSADYSQIELRIMAHLSGDEGLLHAFSHGEDVHRATAGEIF
GVTPLEVGPDQRRVAKSINFGLIYGMSAFGLARQLGLERSAAQTYIDRYFARYPGVARYM
EEAREMARQKGYVETAFGRRLWFPEIRSSNGNRRQGAERAAINAPMQGTAADLIKLAMIA
VQEWLEKSGLKSKLVLQVHDELLLEVPDDELMDIRTHLPRLMSQVAELKVPLVVEVGVGP
NWEAAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttattgttggtggacggttcgtcctatctttatcgcgctttccacgccctg
cccgacttgcgtaacaaggctggcgagccgacaggcgccatctacggcgttctgaacatg
ctacgtcgtctcgagagcgactacaaggcagactacaaggccgtcgtcttcgatgccaag
ggcaagaccttccgtgacgactggtatccggaatacaaggcgcaccgcccgccgatgccg
cccgaaatggtcggccagatcgagccgttgcacgctgccatcaaggccgccggctggccg
ctgctcatggtcgatggcgtcgaggccgacgacgtgatcggcacgctggcgacgaatgct
gcggtggacggcattaacacgctgatttcgaccggtgacaaggatctgacccaactggtc
aatccgctcgtccgctggtacaacacgatgagcaacgaactgctcgacgaggccggcgtc
gaggccaagttcggcgtgcccccggacaagattgttgattatctggcgctggttggtgac
accgtcgacggcgtaccgggcgtcgccaaatgcgggccgaaaaccgcgctcaaatggctg
gcgcaatacggatcgctcgacgaaatcgtcgcccatgccgacgaaatcggcggcgtcgtc
ggccagaatctgcgcgaccacctcggctttttgccgctgggaaaaaagctggttaccgtc
gcctgcgacctcaccaacctgccagcaccggccacgctgaacgcaacagcgcccgatctc
gccacgctgcgcgaactctacacccgttaccagttccgctcgtggctggccgatatcgac
ggtccggaagcggccgccgacatcccggcccgcacggtttccgacgccgcagctccggcg
ctccaaggcaaaatcgacgttacctacgaaactgtcctgagctggccgcaattcgatgcc
tggctggccaaaatcgaagcggcagaactgacggcgctcgacaccgaaacgaccagcctc
gactccttcgccgcccgcatcgtcggcatttcgctctcggtcaaaccgggcgaagcttgc
tacatcccgctcgcccacactgcccccggcgttgccgaccagttgccgcgtgacgaagtg
ctggaaaagctcaaaccctggctttccacggtcaaccggaaaaaagtgctgcaaaacgca
aagtacgaccagcacgtcttcgccaaccacggcatcacgctggccggcatagaacacgac
accatgctgcaaagctacgtcatcgagtccgacaagggccacgacctcggccagctatgc
acccgccacctcggcctcgacaccatcgcctacgaagacctgtgcggcaagggcgccaag
cagatcagcttcgaccaggtcgacatcgagcgcgccgccatctactcggccgaagacgcc
gacgtcaccctacgcgtccataacgtcctgcacccgcaattcgccgacgaacccggtttg
agccgcatctaccacgacatcgagatgccggcccgccaggtcatctggcagatcgagcgc
aacggtatcttgatcgacagcgatgttctgagccggcaaagccacgaaatgggccagaag
atcatggccctcgaagcgcaggcttacgaactggccggccagcccttcaacctcgcctca
cccaagcaactcggcgacatcctgtttgaaaaactgggcctaccggtcaagaagaaaaca
ccctccggcggcccgtccaccgacgaggaagtgctctccgaactcgcactcgactacccg
ctacccaagctgctgctcgaacaccgcagcctgtccaaactcaagggcacctacaccgac
aagctaccacgcatggtcaacacgcaaaccgggcgagtgcatactcacttctcgcaggca
tccgttgtcaccgggcgccttgcctcgaccgaccccaacctgcagaacatcccggtacgc
agcgaggaaggccggaagatccgtactgccttcatagcacccgaaggttcgagcatcgtc
tcggccgactactcgcaaatcgagctgcgcatcatggcccacctctcgggcgacgaaggc
ttgctccacgccttctcacacggcgaggatgtgcaccgcgcgacggccggcgagatcttc
ggcgtcacaccgctcgaagtcggccccgaccagcgccgcgtcgccaagagcatcaatttc
ggcctgatctacggcatgagcgccttcggcctcgctcgccagctcgggctggaacgcagc
gccgcacagacctacatcgaccgctatttcgcccgctaccccggcgtcgcccgttacatg
gaagaggcccgggaaatggcgcggcaaaaaggctacgtcgaaaccgccttcggccgccgc
ctgtggttcccggaaatccgttcgagcaacggcaaccgccgccagggggcagagcgcgcc
gcgatcaacgcgccgatgcagggcacagccgccgacctgatcaagctggcgatgatcgcc
gtgcaggagtggctggaaaaatcggggctgaaatcaaaattggtgctgcaggtacacgac
gaactgctgctcgaagtgccggacgacgaactgatggacatccgtacccacctgccccgc
ctgatgagtcaggtcgccgaactcaaggtgccgctggtcgtcgaagtcggcgtcgggccg
aactgggaagccgcgcactga
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