Ferribacterium limneticum: KI610_04640
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Entry
KI610_04640 CDS
T07599
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fle
Ferribacterium limneticum
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fle03016
]
KI610_04640 (truA)
Enzymes [BR:
fle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KI610_04640 (truA)
Transfer RNA biogenesis [BR:
fle03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KI610_04640 (truA)
Prokaryotic type
KI610_04640 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UCV19865
LinkDB
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Position
950390..951178
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AA seq
262 aa
AA seq
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MRVALGIEYCGTAFHGWQSQAGGGTVQDALESALREIAGVPVGVMCAGRTDAGVHASHQV
VHFETSVERPLTAWVRGVNSNLPAGVAVRWAQEVGDEFHARFSARGRRYRYLLLNRPQRP
GLWAGRVGWFHGTLELAAMQEACGRLLGEHDFSAFRAAGCQAKSPVKTLSRAEVRQCGNM
FVFDFEASAFLHHMVRNLVGTLVYIGKEAQSPGWIDELLQMKDRKLAAPTFSPDGLYFRG
PIYEPHWGLPDPDDDFLDGLLK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagagttgccttgggcatcgaatactgcggtactgccttccatggctggcaaagccag
gccgggggcggcaccgtgcaggatgcgctggagtcggcgctgcgtgaaattgccggcgtg
ccggtgggtgtgatgtgtgccggacggaccgatgccggcgtgcatgcgagccatcaggtt
gtgcatttcgaaacttcggtcgagcgtccgctgaccgcctgggtgcggggtgtcaattcg
aatttaccggcgggtgttgctgtgcgctgggcgcaagaggtgggcgatgaattccacgcg
cgcttcagcgcccgtggccggcgttaccgctacctgctgctcaatcggccgcagaggccg
ggtttgtgggcggggcgggtcggctggtttcatggaacgctcgaactggcggcgatgcag
gaagcctgcggtcgactgctcggcgagcatgatttttcggcttttcgcgccgcgggttgc
caggccaagtcaccggtcaagacgctgtcgcgggccgaagtccggcagtgcggcaatatg
tttgtcttcgattttgaggccagcgcctttctgcatcacatggtgcgcaatctggtcggt
acgctggtctatatcggcaaggaggcgcaatcgccgggctggattgacgaattgttgcag
atgaaagaccgcaagctggcggcgccgaccttttcgccggatggcctgtatttccgcggc
ccgatctatgaaccgcactgggggctgcccgatccggacgacgattttctcgatgggctg
ctgaaatga
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