Ferribacterium limneticum: KI610_04790
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Entry
KI610_04790 CDS
T07599
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fle
Ferribacterium limneticum
Pathway
fle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI610_04790 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fle03019
]
KI610_04790 (recQ)
03400 DNA repair and recombination proteins [BR:
fle03400
]
KI610_04790 (recQ)
Enzymes [BR:
fle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI610_04790 (recQ)
Messenger RNA biogenesis [BR:
fle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KI610_04790 (recQ)
DNA repair and recombination proteins [BR:
fle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KI610_04790 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UCV19895
LinkDB
All DBs
Position
complement(979901..981724)
Genome browser
AA seq
607 aa
AA seq
DB search
MTVGTPSALAILRDVFGYPAFRGAQAEIIDHIGNGGDALVLMPTGGGKSLCYQIPALLRP
GCAIVVSPLIALMQDQVDALTQLGVKAACLNSTLDWREAQAIEQQMFAGQIDLVYIAPER
LLVDRTLSMIDALYEAGKLALFAIDEAHCVSQWGHDFRPEYLQLSTLHERYPNVPRIALT
ATADKATQNEMLVRLGLTEARVFLSSFDRPNIRYTVVEKDNAKKQLLGFLAGRKGQAGIV
YCLSRKKVEETAEWLSAQGYPALPYHAGLPAPTRAANQRRFLREEGLVMCATIAFGMGID
KPDVRFVAHLDLPKSIEAYYQETGRAGRDGEPAEAWMAYGMQDVALQHARIAESGAGEGQ
KILESQRLTALLSYCEAPRCRRQVLLNYFAEEREPCGNCDVCIEPPELWDGTLAAQKALS
AIFRTGMRFGVTHLTDVLRGKATDKIKQWNHDQLPTFGVGADLDDHGWKSVFRQLAAAGL
VHVDMAEHGALQLTDAAREVLKGQRQVQLRRPAKRKASSSSSRSSAVVHSELSSADEVLF
QLLRAWRSDTAKEQAVPAYVILHDKTLRELAEVRPTSHGMLAGITGMGSAKIEHYGAELL
DLIRNEG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgggaaccccctccgccctcgccatcctgcgcgacgtcttcggctatcccgcc
tttcgcggcgcccaggccgagatcatcgaccacatcggcaacggcggcgacgcgctcgtc
ctcatgccgaccggcggcggcaagagcctgtgctaccagatccccgccctcctccgcccg
ggctgcgccatcgtcgtctcgccgctcatcgcgctcatgcaggaccaggtcgatgccctg
acccagcttggcgtcaaggccgcctgcctcaattcgacgctcgactggcgcgaggcgcag
gccatcgagcagcagatgttcgccggccagatcgacctcgtttacatcgccccggaacgc
ctgcttgtcgaccgcacgctgtcgatgatcgacgccctctacgaagccggcaaacttgcc
ctcttcgccatcgacgaagcgcactgcgtctcgcaatggggccacgatttccgcccggaa
tacctgcaactgtcgacgctgcacgagcgctatccgaacgtcccgcgcatcgccctgacg
gccacggccgacaaggcaacgcagaacgaaatgctggtccgccttggcctgaccgaagcg
cgcgttttcctgtccagcttcgaccggccgaacatccgctacaccgttgtcgaaaaagac
aacgccaagaaacagttgctcggcttcctggccgggcgcaagggccaggccggcatcgtc
tattgcctgtcgcgcaagaaggtcgaggagacggccgaatggctatcggcccagggctac
ccggcgctgccttaccatgccggcctgcccgccccgacgcgcgccgccaaccagcgccgc
tttctgcgcgaggaagggctggtcatgtgcgccaccatcgccttcggcatgggcatcgac
aagccggacgtccgtttcgtcgcccacctcgacctgccgaaaagcatcgaagcctactac
caggaaaccggccgcgccggccgcgacggcgaaccggccgaagcgtggatggcctatggc
atgcaggacgtcgcgctgcagcatgcgcgcatcgccgaatcaggcgccggcgaaggccag
aagattctcgaatcgcaacgcctgaccgccctgctctcctactgcgaagcgccgcgctgc
cggcgccaggtattgctcaattattttgccgaggaacgcgagccctgcggcaactgcgac
gtctgcatcgagccgccggaactgtgggatggcacgctggccgcgcaaaaggcgctctcc
gcgatcttccgcaccggcatgcgtttcggcgtcacgcacctgaccgatgtcctgcgcggc
aaggcaaccgacaagatcaagcagtggaaccacgaccagctgccgactttcggcgtcggc
gccgacctcgacgaccatggctggaagagcgtcttccgccaactggcagcggccggactg
gttcatgtcgacatggccgaacacggcgcgctgcaactgactgacgccgcccgcgaagtg
ctcaagggtcaacgccaggtgcaactgcgccggccggccaagcgcaaggccagctcgtcg
tcctcacgcagcagcgcggtggtgcacagcgaactgtcgtcggccgacgaggtgctgttc
caactcctgcgcgcctggcgcagcgatacggccaaagaacaagccgtgccggcctacgtt
attttgcatgacaagaccctgcgcgagctggccgaagtccgcccgaccagccacggcatg
ctggccggcatcaccggtatgggtagcgccaagattgagcactacggcgccgaactgctc
gacctgatccgcaacgagggctga
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