Ferribacterium limneticum: KI610_09060
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Entry
KI610_09060 CDS
T07599
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
fle
Ferribacterium limneticum
Pathway
fle02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI610_09060 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fle03000
]
KI610_09060 (nifA)
Transcription factors [BR:
fle03000
]
Prokaryotic type
Helix-turn-helix
Other families
KI610_09060 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
Mg_chelatase
AAA_2
nSTAND3
AAA
AAA_16
HTH_23
Kinesin
Parvo_NS1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UCV20692
LinkDB
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Position
complement(1883137..1884819)
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AA seq
560 aa
AA seq
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MATPSKKNNNENSMHEHIIHSLSDECPPPGGFCRTHELNIQLLAALYAVSRVLSRSLDFN
ETLRDVLRVLHDEAGLTRGLISVLDPETGKLNIRTIYTPEGPILDDNQYGPGEGIIGLIL
EKPRTIKLVRVADEARFLNRAQVYSPELPFIAVPIKVGGDLKGVLAVQPEAPEDGLLEER
AQFVEMVSNLIGQSLSLSMAVAQEKSSLLEERDLLRRTVRHQFGFDSMVGRSAVMRRVFD
QARMVAKWNTTVLIRGETGTGKELIANAIHYNSPRARNALVKLNCAALPENLLESELFGH
ERGAFTGAVEARKGRFEQAHGGTLFLDEIGEVSAAFQAKMLRILQEGEFERVGGSKTIKV
DVRIIAATHRDLETAVEMGDFREDLFYRLNVMPLFLPPLRERIEDIPEIARHLLTKIGND
QKRKLKLTDMANRRLANHEWPGNVRELENCLERAAVLSDDGNIDVDLIRFPSVRERTSPR
PIRSAASAPPENYHRPAVNPNSGANPEIDIDDPNLSEKERVIAALEQAGWVQAKAARILG
MTPRQIAYRIQTLNIEVKQF
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccatctaagaagaacaacaacgagaacagcatgcacgaacacatcattcac
tccctctcagacgaatgcccgccgcccggcggtttctgccgaacgcacgagctgaacatc
cagttgctggcagcgctctacgccgtcagccgggtgctcagccgttcgctcgatttcaac
gaaaccctgcgtgacgtcctgcgcgtcctgcacgacgaggccggcctgacgcgcggcctg
atcagcgtgcttgatccggaaaccggcaagctcaacatccgcaccatctacacgccggaa
ggcccgatcctcgacgacaaccagtacggcccgggcgaaggcatcatcggcctgatcctc
gaaaagccgcgcaccatcaagctcgtgcgcgtcgccgacgaagcccgtttcctcaaccgc
gcccaagtctattcgccggaactgcccttcatcgccgtgccgatcaaggtcggcggcgac
ctcaagggcgtgttggcagttcagccggaagcgccggaggacggcctgctcgaggagcgc
gcccagttcgtcgagatggtctccaacctgatcggccagagcctcagcctgtcgatggcc
gtcgcccaggaaaagtcatcgctgctcgaagagcgcgacctgctccggcgtaccgtccgc
caccagttcggtttcgacagcatggtcggccgctcggccgtcatgcgccgggttttcgac
caggcgcgcatggtcgccaaatggaacacgacggtgttgatccgtggcgaaaccggcact
ggcaaggaactgatcgccaacgccatccactacaactcgccgcgcgcccgcaatgcgctg
gtcaagctcaactgtgcggcgctgccggaaaacctgctcgaatccgaactcttcggccac
gaacgcggcgccttcaccggtgctgtcgaggcgcgcaagggacgtttcgaacaggcccac
ggcggcacgctgttcctcgacgaaatcggcgaagtctcggccgccttccaggccaagatg
ctgcgcatcctgcaggaaggcgaattcgagcgcgtcggcggtagcaagaccatcaaggtc
gatgtccgcatcatcgccgcgacgcaccgcgacctcgaaaccgccgtcgaaatgggcgac
ttccgcgaagacttgttctatcgcctcaacgtcatgccgctctttctgccgccgttgcgt
gagcgcatcgaggacatccccgaaatcgcccgccacctgctcaccaagatcggcaacgac
cagaaacgcaagctcaaactgaccgacatggccaaccgccggctggccaatcacgagtgg
ccgggcaatgtgcgcgagctggaaaactgcctcgaacgcgccgccgtgctctccgacgac
ggcaacatcgacgtcgatctgatccgcttcccgagcgtccgcgaacgcaccagcccgcgt
ccgatccgctccgctgccagcgccccgccggaaaactaccatcgtcctgcggtcaacccg
aattccggggcaaatccggaaatcgacatcgatgatccgaacctgtcggaaaaggaacgc
gtcattgccgcgctggaacaggccggctgggtgcaggcaaaggcggcgcgcattctgggc
atgacgccgcggcagattgcctatcggattcagacgctgaatattgaggtgaagcagttc
tga
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