Ferribacterium limneticum: KI610_10555
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Entry
KI610_10555 CDS
T07599
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fle
Ferribacterium limneticum
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fle03016
]
KI610_10555 (truB)
Enzymes [BR:
fle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KI610_10555 (truB)
Transfer RNA biogenesis [BR:
fle03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KI610_10555 (truB)
Prokaryotic type
KI610_10555 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UCV17289
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All DBs
Position
2202456..2203355
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AA seq
299 aa
AA seq
DB search
MQVKKTWKQVDGVLLLDKPIGLTSNDALQKARRLFSAAKGGHTGTLDPLATGLLPLCFGE
ATKFSADLLDADKTYEAVLKLGVTTDSGDAEGKVTATSTVNTEKAAILKLLPQFTGDIQQ
IPPMHSALKRDGRPLYELARQGIEVEREARAVTIYAIDLLDFAGDSLTLRVACSKGTYIR
VLAADIGAVLGCGAHLTALRRTRVGDLELDGAVTLAELEGLDEAGRMTRLKPVDALLLTL
PILTVEGEAAQRFSHGNPVDLPPGLSGKIRVYENGKLIGIGEPGSGDRLWPKRLVQLAD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcaagaagacctggaaacaggtcgatggtgtgctgttgctcgacaaacccatc
ggattgacctccaacgacgcgctgcaaaaggcgcgccgcttgttctcggcggccaagggc
ggccataccggcacgctcgacccgctggcgactggcttgttgccgctgtgtttcggcgag
gcgacgaaattctcggctgatttgctcgacgcggacaagacctacgaggctgtcctaaaa
ctcggtgtgaccaccgattccggcgacgccgaaggcaaggtgacggcgacttccacggtc
aacacggaaaaagccgcaattttgaaattgctgccgcaattcactggcgatattcagcag
attccaccgatgcattcggccctgaagcgtgacggtcggccactctatgaactggctcgc
caagggatagaagtcgagcgcgaggcgagggcggtgacgatttacgccattgatctgctc
gactttgccggtgactctctgacgcttcgcgtggcgtgtagcaagggcacctacatccgt
gttctggccgccgacatcggcgcagtactcggttgcggcgcacatctgacggccctgcgc
cggacccgggttggcgatcttgagctggacggcgccgttaccctggccgagctggaaggt
ctggacgaagcagggcgcatgacgcgcctcaagccggtcgatgcgctgttgctcacgctg
cccatcctgactgtcgaaggtgaggcggcgcagcgtttcagccacggtaatccggttgat
ttgccgcccggcctgagtggcaagatccgcgtctatgagaatggcaagctgattggtatc
ggcgaaccgggctccggggatcgtttgtggccaaaacggctggttcaactcgctgattaa
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