Ferribacterium limneticum: KI610_10635
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Entry
KI610_10635 CDS
T07599
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fle
Ferribacterium limneticum
Pathway
fle00300
Lysine biosynthesis
fle00470
D-Amino acid metabolism
fle01100
Metabolic pathways
fle01110
Biosynthesis of secondary metabolites
fle01120
Microbial metabolism in diverse environments
fle01230
Biosynthesis of amino acids
Module
fle_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KI610_10635
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KI610_10635
Enzymes [BR:
fle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KI610_10635
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UCV17302
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All DBs
Position
complement(2221328..2222533)
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AA seq
401 aa
AA seq
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MNQFSAAGNELLVGGLPLSRLAERVGQTPFYAYDRKLLRTRVAELHTALPANVKLHFAMK
ANPMPAIVGFMACLVDGIDVASAGELKIALDAGADPHEISFAGPGKRDNELRQAVAAGVL
INVESFREVELLAGISQALGLPARIAVRVNPDFELKGSGMKMGGGPKQFGVDAEQVPELL
TKIGERNLAFEGFHLFAGSQNLKAESICEAQQKSYDLALTLSRHTPSPISFLNLGGGFGI
PYFPGEKQLDLTSIGQNLEQLSQRASVDFPGASLVIELGRYLVGEAGIYVSRVVDRKVSR
GQTFLVVDGGLNHHLSASGNFGQVIRKNYPVAIGNRMNAGITEIASVVGPLCTPLDILAD
RMTLAVAEPGDLVVVFQSGAYGASASPQRFLGHPEVNEILV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttttccgctgccggaaacgaacttctggtcggtggcttaccgctatctcga
ctggccgaacgagtcgggcaaacccctttctacgcctacgaccgcaaactgctgcgtacg
cgggttgccgaattgcataccgcgctgcctgcaaatgtcaaactgcactttgccatgaag
gccaatccgatgccggctatcgttggcttcatggcctgccttgtcgatggtatcgacgta
gcttctgcaggagagttgaaaattgctctggatgcaggggcagacccacatgaaatcagc
ttcgccggccctggcaagcgggacaatgaactccgccaggcagttgcggctggtgttttg
atcaacgtcgaatcatttcgcgaagtcgagcttttggcaggcatttcgcaagcgcttggg
ctaccggcccggattgccgtacgcgtcaatccggacttcgagctcaaaggctccggcatg
aaaatgggcggcggccccaaacagttcggtgtcgatgccgaacaggtgcctgagctgctg
accaaaatcggcgaacggaatctggccttcgaaggcttccacctatttgccggctcgcaa
aatctgaaagccgaatcgatttgcgaggcacagcaaaaatcctacgacctggcgctcacg
ctctctcgccatactccctcaccgatcagtttcttaaacctcggcggcggattcgggatt
ccctacttcccaggtgaaaagcagctcgatctgacaagcattggtcagaaccttgaacaa
ctttcccagcgagccagcgtcgattttcccggcgcctcgctggtcatcgaactcggccgc
tacttagtcggcgaggcgggcatttatgtttcccgagtggttgaccgcaaggtttcgcgc
gggcagacttttctcgttgtcgatggtggcctgaaccaccatctttcggcctcgggcaac
ttcggtcaggtcatccgaaaaaactatccagtcgccatcggcaatcgcatgaatgccgga
atcaccgaaatcgcttccgtagtcggtccgttatgtacgccgctggacatcctggctgat
cgcatgactctcgcagtggccgaaccgggtgatctggtcgtggtattccagtccggcgcc
tacggggctagcgccagcccacaacgtttccttggacacccggaagtcaacgaaatatta
gtttga
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