Ferribacterium limneticum: KI610_11885
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Entry
KI610_11885 CDS
T07599
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fle
Ferribacterium limneticum
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fle03400
]
KI610_11885
DNA repair and recombination proteins [BR:
fle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI610_11885
Archaeal homologous recombinant proteins
KI610_11885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
RsgA_GTPase
nSTAND3
AAA_21
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UCV17527
LinkDB
All DBs
Position
2473313..2476879
Genome browser
AA seq
1188 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWTIDFTKPPFTDNCLFAITGPTGAGKSTLLDAICLALYHQTPR
LKTISATDNDIMTRHTADCLAEVEFEVKGAVYSAFWSQRRARDKIDGALQAPKVELATGD
GTILSTQTNDKLKRIAEITGLDFPRFTKSMLLAQGGFAAFLNASANERAELLEELTGTEI
YGEISRKVFEQAREAKSQLDQLKARADGMELLSDEQRAAMQLEVTRLDSQLTDVQRRHQQ
TQAQRQWRLDLAQSEQEIKTAEGRLLEADTALTAAAPDLKKLADSEPAEALKPLHLQWQQ
AGAACQQSEVELKALHAERETRQAEQLAQHQAASQFSAQLAAQTQQALQQSQREAKELDD
FCAAQPQRAQLGERLGVWRQQFEQRAKLVRDLAAQQQAQQKLARELAETAQQIEKQTATV
NREKEAKTKADAALEKTQTEQNQRLAGQTLAELRQHWQGEQAGLNRWQQLETLAQRRREL
AALQTTQSTQLQQIQEKIAAQEKGLTALREQHKELAAQVADKQKLLDQERRIQSLEAHRR
QLQPDEACPLCGAHDHPAIADYAALDISATETALKEKQAALDALVQKGQQARAEQAATQA
TQKEWLAQQAKTTQETSRLQTEWSELLAGLANATPLADSAWQEAETLAAARSTAEQALAR
LTQRLHAADQGEQALNAARKTAAEAAQTLLNASNQLDLLQQTAQTGQQRQTELAKAAQAL
VQEQTELDEKLGATLTAASYEIPTEPASWLQERDGEWQHWQQTQKRRHELAEILVKQQEQ
FNAAQAQAKHWSEQLANLQLLRSTGNIGQNQNPESFTADPATALARCADAIADLTRQLAA
QQGRQTQLDANLAQQQKTLAEATTAWQTALATSPFADLAAYSAALLPPQERQRLQQIKET
RQLAQQQAAAVLKAASEKLLRLQSNPPDSPHPPPSLPLEGGGDKHLAPPPALFPPLQGEG
RGGDGFIPPLAELEEILTQLETHRRTLSEQLGAQRALLTRDQQARQNQQTLFAQVAAQTT
ESDLWQRLDSLIGSARGDKFRKFAQGLTLDHLLHLANTHLARLHGRYLLRRKTTGELELD
IVDSWQGEVARDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDADTLE
IALNALDTLNASGKMIGVISHVEGMKERIPAQIRVEKGGGVGYSRLRI
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcaccctgcgcctgaaaaacctcaattcgctcaaaggcgaatggaccatc
gacttcaccaagccgcctttcaccgacaactgcctgttcgccatcaccggcccgaccggc
gccggcaaatcgaccctactcgacgccatctgcctcgccctctaccaccagacgccgcgc
ctgaagaccatctcggccaccgacaacgacatcatgacgcggcacaccgccgactgcctg
gccgaggttgaattcgaagtgaagggcgccgtatacagcgccttctggagccagcgccgg
gcccgcgacaagatcgacggcgcgctgcaggcacccaaggttgaattggccactggtgac
ggcaccatcctgagcacgcagaccaacgacaaactcaaacgcatcgccgaaatcaccggc
ctcgatttcccccgtttcaccaagtccatgctgctcgcccagggcggcttcgcggccttt
ctcaatgccagcgccaacgagcgggccgaactgctcgaagagctgaccggcaccgagatt
tacggcgaaatttcgcgcaaggttttcgagcaggcgcgcgaggccaaaagtcagctcgac
caactcaaagcccgcgccgacggcatggaactgctcagcgacgagcaacgcgccgccatg
caactcgaagtcacccgcctcgacagccaacttaccgacgtccagcgccgccaccagcaa
acccaggcccagcgccagtggcgcctcgatctggcgcagagcgagcaggaaatcaaaacc
gcagaaggcaggctacttgaagccgacaccgcactgactgccgccgccccggacctcaaa
aaactcgccgacagcgagccggccgaagccctgaaaccactgcacttgcaatggcaacag
gccggtgccgcctgtcagcaaagcgaagtcgaactcaaggccctgcacgccgaacgcgaa
acgcggcaagccgaacaactcgcccaacaccaagccgccagccagttcagcgcccagctc
gccgcccagacccagcaagccctgcaacaaagccagcgcgaagccaaagaactcgacgac
ttctgcgccgctcagccgcaacgcgcccaactcggcgaacgcctcggcgtctggcgccag
cagttcgagcagcgggcaaaactagtccgcgacctcgccgcccagcagcaggcgcagcaa
aagctcgcccgggaactcgctgaaaccgcgcagcagatcgaaaaacagactgccacggtc
aaccgggaaaaagaggcaaaaaccaaagccgacgccgcgctggaaaaaacccagaccgag
cagaatcagcgcctcgccggccagaccctggccgaactgcgccagcactggcaaggcgaa
caagccggcctgaatcgctggcaacaactcgaaaccctcgcccaacgccgccgcgaactg
gccgcgctgcaaacgacgcaaagcacgcaactgcagcagattcaggaaaagatcgcggcg
caggaaaagggcctgaccgccctgcgcgaacagcacaaagaactcgccgcccaggtcgcc
gacaagcaaaagctgctcgaccaggaacgccgcatccagagcctagaagcgcatcgccgc
caactgcaaccggacgaagcctgcccgctgtgcggcgcccacgaccacccggccattgcc
gactacgccgcgctcgacatttccgccaccgaaaccgccctcaaggaaaagcaggcagcg
ctcgacgcgcttgtccagaaaggccagcaagccagggccgagcaagccgcgacgcaggcc
acgcaaaaagaatggctggcccagcaggccaagaccacgcaggaaacaagccgcctgcaa
acggaatggtccgaactgctggctggcctcgccaacgctacgccgctggcggacagcgca
tggcaggaagccgaaacccttgccgccgcgcgcagcaccgccgaacaagcgctggcccga
ctcacccagcgcctgcacgccgccgatcagggcgaacaagccctaaacgccgcccgcaaa
accgccgccgaagccgcccaaaccctgctcaacgccagcaatcagctcgatctgctgcaa
caaaccgcgcaaaccggccagcaacgccagacagaattggccaaagccgcgcaggcactg
gttcaggaacagaccgaactcgacgaaaaactgggcgcaacgctgaccgccgccagctac
gaaatcccgaccgaacccgcctcctggctgcaggaacgcgacggcgaatggcaacactgg
cagcaaacgcagaaacgccgccacgaactggccgaaatcctcgtcaaacaacaggaacaa
ttcaacgccgcgcaggcccaagcaaagcactggtcagaacaactggccaaccttcaattg
ctacggtcaaccggaaatatcggccaaaatcaaaatcccgaatcgttcaccgccgatccc
gcaaccgccctagcccgctgcgccgacgccatcgccgacctgacccgccaactcgccgcc
caacaaggccgccagacccaactcgacgccaacctcgcccaacagcaaaaaaccctcgcc
gaggccacaaccgcttggcaaacagccctcgccaccagccccttcgccgacctcgccgcc
tacagcgccgcgctgctaccgccacaagaacgccagcgcctgcagcaaatcaaggaaacc
cggcaactggcgcagcaacaagctgccgccgtcctcaaggccgccagcgaaaaactgctg
cgcttgcaaagcaacccgccagattcgccccatcccccacccagcctcccccttgaaggg
ggaggagacaaacaccttgccccgccccccgccttgttccccccccttcaaggggagggc
cggggtggggatgggttcattccgccgcttgccgaactagaagaaatcctcacccaactc
gaaacccaccgccgcaccctaagcgaacaactcggcgcccaacgcgccctcctaacccgc
gaccaacaagcccgccaaaaccagcaaaccctcttcgcccaggtcgccgcccaaacaacc
gaatccgacctctggcaacgcctcgacagcctgatcggctcagccagaggcgacaaattc
cgcaagttcgcccagggcctgacgctcgaccacctgctccacctcgccaacacccacctc
gcccgcctgcacggccgctacctgctgcgccgcaaaaccactggcgaactcgaactcgac
attgtcgacagctggcaaggcgaagtcgcccgcgacacccgcaccctctccggcggcgaa
agcttcctcgtcagcctggcactcgccctggccctctccgacctggtcagccacaagacc
agcatcgactcgctcttcctcgacgaaggcttcggcaccctcgacgccgacactctggaa
atcgccctgaacgccctcgacaccctcaacgccagcggcaagatgatcggcgtcatcagc
cacgtcgaaggtatgaaggagcgcatcccggcgcagattcgggtggaaaagggcggcggg
gttgggtattcgcggttgaggatttag
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