Ferribacterium limneticum: KI610_12390
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Entry
KI610_12390 CDS
T07599
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
fle
Ferribacterium limneticum
Pathway
fle02020
Two-component system
fle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI610_12390
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KI610_12390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
fle02022
]
KI610_12390
Two-component system [BR:
fle02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
KI610_12390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_16
AAA_5
FleQ
HTH_8
AAA
OKR_DC_1_N
nSTAND3
TIP49
AAA_2
Motif
Other DBs
NCBI-ProteinID:
UCV17623
LinkDB
All DBs
Position
complement(2576697..2578106)
Genome browser
AA seq
469 aa
AA seq
DB search
MAGAHVLVVDDDEDILKLLTMRLRAKGFRITAVGSAEQALAQIAVDPPRVVVSDVRLPGL
DGLALFEEIRRTRPTLPVILLTAHGNIPDAVAATSRGVFGYLTKPFDSQILLEKIDRALQ
LSAPTSHPGDEPCAAGKGDDAWMEGVIFRSSKMAELMAEARMVAASDASVLIRGESGSGK
EVLARAIHRASPRAKGPFVAINCGAIPEQLLESELFGHAKGAFTGAGASRVGLFQTANGG
TLFLDEIGDMPLALQVKLLRVLQERVVRPVGTTKAEPVDVRLLSATHRDLDLAMAQGQFR
EDLYYRLDVVSLTLPRLDERREDIPLLALHFVQLLAGKYGKPVNGFAPEALEALATAAWP
GNVRQLFNVVEQSCALTSTPLIPLTLVQRALRVPVMDALNYAEAKQRFERNYLVQLLKLT
DGNVADAARLAERNRTEFYRLLQKHDLTPAMFRSEGDSPPSGGDRPGPA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcccacgtactggtcgtcgatgacgacgaagatatcctcaagctgctgacc
atgcgcctgagggccaagggtttccgcatcaccgccgtcggctcggccgagcaggcgctg
gcccagatcgccgtcgatccgccgcgcgtcgtcgtcagcgacgttcgcctgcctgggctg
gacggcctggcactgttcgaggaaatccgccggacccggccgacactgccggtcatcctg
cttaccgcccacggcaacattcccgatgccgttgccgccacctcacgcggcgttttcggc
tacctgaccaagcctttcgacagccagattctgcttgaaaagatcgaccgcgccctgcaa
ctctcggcgccaacctcgcaccccggtgacgagccatgcgcggcagggaagggcgacgac
gcctggatggaaggcgtcatcttccgcagcagcaagatggccgaactgatggccgaagcg
cgcatggttgccgcctccgacgccagcgtgctgatccgtggcgaaagcggcagcggcaaa
gaggtgctggcccgcgccatccaccgcgccagtccgcgcgccaaggggccgttcgtcgcc
atcaactgcggcgccatccccgaacaactgctcgaatccgaactcttcggccacgccaag
ggcgccttcacgggcgccggcgccagtcgcgttggcctgttccagaccgccaacggcggc
acgctcttcctcgatgaaatcggcgacatgccgctcgccctccaggtcaagctgttgcgc
gtcctgcaagaacgcgtcgtccggccggtcggcacgaccaaggccgagccggtcgatgtc
cgtctgctctcggcgacccatcgcgacctcgatctcgccatggcccagggccagttccgc
gaagacctttattatcgtctcgacgtcgtgtcgctgaccctgccgcgccttgatgagcgg
cgcgaagacatcccgctgctcgccctgcatttcgtccagctgctcgccggcaaatacggc
aaaccggtcaacggctttgcccccgaagcccttgaagcgctggccacggccgcctggccg
ggcaacgtccgacaactgttcaacgtcgtcgaacaaagctgcgcgctgacctcgacgccg
ttgattccgctgacgctcgtccagcgtgccttgcgcgtgccggtcatggatgccctgaat
tacgccgaagccaagcagcgtttcgagcgcaactacctcgtccagttgctcaaactgacc
gacggcaacgtcgccgacgccgcccgcctggccgaacgcaaccggaccgagttctaccgt
ctgttgcagaaacacgacctgacgccagccatgttccgcagcgaaggcgatagcccgccg
tcaggcggagacaggccggggccggcctag
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