Ferribacterium limneticum: KI610_16540
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Entry
KI610_16540 CDS
T07599
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fle
Ferribacterium limneticum
Pathway
fle02024
Quorum sensing
fle03060
Protein export
fle03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KI610_16540 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KI610_16540 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KI610_16540 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fle02044
]
KI610_16540 (ffh)
Enzymes [BR:
fle01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KI610_16540 (ffh)
Secretion system [BR:
fle02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KI610_16540 (ffh)
Eukaryotic Sec-SRP protein
KI610_16540 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_31
cobW
AAA_30
AAA_16
AAA_19
AAA_33
AAA_14
APS_kinase
T2SSE
ATP_bind_1
KTI12
ResIII
Motif
Other DBs
NCBI-ProteinID:
UCV18387
LinkDB
All DBs
Position
complement(3472418..3473773)
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AA seq
451 aa
AA seq
DB search
MLDNLTNRLARVMKTLKGEARLTETNIADALREVRMALLEADVALPVVKDFIAAVKEKAV
GEAVIGSLSPGQALIGVVHAELTKIMGDAHEGINFNTQPPAIILMAGLQGAGKTTTVGKL
GKFLKENHKKKVLVVSCDVYRPAAIEQLKSVAGQAGIDFFPSTIGEKPEAIAVAAIDWAK
RHYHDVLLVDTAGRLAIDEEMMAEIKRLHAAINPIETLFVVDAMLGQDAVNTAKSFNEAL
PLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFSGVGEKLTGLEAFHPERMASRILGMGDV
LSLIEDAKKGLDEEKAIAFAKKLKSGKGFDLNDFKEQIGQMRNMGGLSALMDKMPAQIAQ
MAGQMPAGAENKMVGRVEGIINSMTPLERAKPELIKASRKRRIAMGAGVQVQEVNRLLNQ
FEQSQKMMKMMAKGGIGKLMRGMKGMMPGMR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgctcgataacctgaccaatcgccttgctcgcgtcatgaagacgctcaagggcgaagct
cgcctgaccgaaaccaatattgccgatgccttgcgcgaagtgcgtatggcgctgctcgag
gccgacgtggccttgccggtggtcaaggattttatcgctgcagtgaaggaaaaggcggtc
ggcgaggcggtgatcggttcgttgagcccgggtcaggcgctgatcggcgttgtgcacgcc
gaactgaccaagatcatgggcgatgcccacgaaggcatcaatttcaatacccagccgccg
gcgattatcctgatggctggtttgcagggcgccggcaagacgacgacggtcggcaagctg
ggcaagttcctcaaggaaaatcacaagaagaaggtgctggttgtctcctgtgacgtttat
cgtccggcggctatcgagcagttgaaatcggtggccgggcaggccgggatcgatttcttc
ccgtcgaccattggcgagaagcccgaggcgattgccgtggcggcgattgactgggccaag
cgtcattaccacgacgtgttgctcgtcgatacggccggccgtctggctatcgacgaagaa
atgatggccgaaatcaagcggctgcatgccgcgatcaacccgatcgaaacattgttcgtc
gtcgatgccatgttgggccaggatgcggtcaatacggccaagtccttcaacgaggcattg
ccgctgacgggcgtcgtgctgaccaagctggatggcgattcgcgtggtggtgcagcgttg
tcggtgcgccatgtcaccggcaagccaatcaagttctcgggtgtgggcgagaagctgacc
gggctggaggctttccatccggagcggatggcctcgcggattctcggtatgggcgatgtg
ttgtcgctgatcgaagatgccaagaaaggtctggatgaggaaaaggcgattgccttcgcc
aagaagctcaaatccggcaagggcttcgatctcaacgatttcaaggaacagatcggccag
atgcgcaatatgggcggcctgtcggcgctgatggacaagatgccggcacagatcgcccag
atggccggtcagatgccggccggggctgagaacaagatggtcggacgggtcgaggggatc
atcaattcgatgacgccgcttgagcgggccaagccggaactgatcaaagccagccgcaag
cgtcgcatagcgatgggggcgggggttcaggtgcaggaggtcaatcgcctgctcaaccag
ttcgaacagtcgcagaaaatgatgaagatgatggccaagggcggcatcggcaagctcatg
cgtggcatgaagggaatgatgcctgggatgcgctga
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