Ferribacterium limneticum: KI610_16730
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Entry
KI610_16730 CDS
T07599
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fle
Ferribacterium limneticum
Pathway
fle00260
Glycine, serine and threonine metabolism
fle00630
Glyoxylate and dicarboxylate metabolism
fle00670
One carbon pool by folate
fle00680
Methane metabolism
fle01100
Metabolic pathways
fle01110
Biosynthesis of secondary metabolites
fle01120
Microbial metabolism in diverse environments
fle01200
Carbon metabolism
fle01230
Biosynthesis of amino acids
fle01240
Biosynthesis of cofactors
fle04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KI610_16730
09102 Energy metabolism
00680 Methane metabolism
KI610_16730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KI610_16730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KI610_16730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KI610_16730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KI610_16730
Enzymes [BR:
fle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KI610_16730
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UCV18421
LinkDB
All DBs
Position
complement(3503141..3504391)
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AA seq
416 aa
AA seq
DB search
MFSAKDTLAKVDPELWKAMQAEVQRQEDHIELIASENYVSKAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQIAIDRLKKLFGADAANVQPNSGSQANQAVLMAFAKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLDANEAIDYDKMEALAREHKPKIIVAGASAYALR
IDWERFARIAKEVGAIFWVDMAHYAGLIAAGFYPNPVPFADVVTSTTHKTLRGPRGGVIL
MKAEHEKALNSAIFPGLQGGPLEHVIAAKAVAFKEAATPEFKNYQEQVINNARVMARVLG
EERGLRIVSGRTESHVFLLDLRAKNITGKEAEAALGRAHITVNKNGIPNDPQKPFVTSGI
RIGSPAMTTRGFTEIEAETIAHLVADVLEAPNDEAVAATVRAKVAALCAKFPVYGA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgcgaaagacaccctggcaaaagttgatcctgaactctggaaggccatgcag
gccgaagtgcagcgtcaggaagaccacatcgaactgatcgcgtccgaaaactacgtgagc
aaggccgtcatggaagcccagggctcccagctcaccaacaagtatgccgaaggctacccg
ggcaagcgttactacggtggctgcgaatacgtcgacgtcgtcgagcagatcgccatcgac
cgtttgaagaagctgttcggcgccgatgccgccaacgtccagccgaattccggttcgcag
gccaaccaggccgtgctcatggcctttgccaagccgggcgacaccatcatgggcatgagc
ctggccgaaggtggtcacctgacccacggcatggcgctcaacatgtccggcaagtggttc
aacgtcgtttcctacggcctcgatgccaacgaagccatcgattacgacaagatggaagcg
ctggcccgcgagcacaagccgaagatcatcgtcgccggcgcctcggcctacgccctgcgt
atcgactgggaacgcttcgccaggatcgccaaggaagtcggcgccattttctgggtggac
atggctcactacgccggcctgatcgccgccggtttctacccgaacccggtgcccttcgcc
gatgtcgtgacctcgaccacgcacaaaactctgcgcggcccgcgcggtggcgtcatcctg
atgaaggccgagcacgaaaaggccctcaattccgccatcttccccggcctgcaaggcggc
ccgctcgagcacgtcatcgcagccaaggccgtcgccttcaaggaagccgcgacgccggag
ttcaagaactaccaggaacaggtcatcaataacgcccgtgtcatggcccgcgtactcggc
gaagagcgcggtctgcgcatcgtttccggtcgcaccgaaagccacgtcttcctgctcgac
ctgcgggccaagaacatcaccggcaaggaagccgaagccgccctcggtcgcgcccacatc
acggtcaacaagaacggcatcccgaacgacccgcagaagccgttcgttacctccggcatc
cgcatcggttcgccggccatgacgacgcgtggtttcaccgaaatcgaagctgaaaccatc
gcccatctggtggctgacgtgctcgaggcgccgaacgacgaagccgttgccgccaccgtg
cgtgccaaggttgctgccttgtgcgccaagttcccggtttacggcgcgtga
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