Ferribacterium limneticum: KI610_17015
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Entry
KI610_17015 CDS
T07599
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fle
Ferribacterium limneticum
Pathway
fle03420
Nucleotide excision repair
fle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KI610_17015
03430 Mismatch repair
KI610_17015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fle03400
]
KI610_17015
Enzymes [BR:
fle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI610_17015
DNA repair and recombination proteins [BR:
fle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI610_17015
MMR (mismatch excision repair)
Other MMR factors
KI610_17015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UCV18477
LinkDB
All DBs
Position
complement(3570400..3572544)
Genome browser
AA seq
714 aa
AA seq
DB search
MSDLLANLNSPQLQAVTLPPVHALILAGAGSGKTRVLTTRIAWLMSTGQVGPHGVLAVTF
TNKAAKEMTARLSSLVPINTRGMWIGTFHGLCNRLLRAHYREAGLPQTFQILDSADQLAM
VKRLLKNLNVDDEKYPPRELCHFINAHKEQGLRAAQAEVYDNYTQKRVELYAEYETQCNR
EGVVDFAELLLRCYELLQRNEPLRKHYQDRFRYILVDEVQDTNKLQYAWLKLLAGGGAVV
FAVGDDDQSIYAFRGAEVGNMRDFERDYAGDNVIRLEQNYRSHGNILAAANAIIKNNRER
LGKNLWTDAGEGELIRAFEAYSDLDEARFVVEEIRELVRDGISPTQIALLYRSNAQSRVL
ENELFTKNVPYKVYGGLRFFERQEIKHALAYLRLLGNPDDDTAFLRVVNFPTRGIGARSL
ENLQATAHQTNSSLYNAAASLTGKSGQTVGAFIRLIEQLRVETEGLPLPEMVEHIIEKSG
LAQHYRTDKEGQDRLENLDELINAAATFIDDEGAIGEGGALVSFLTLASLEAGEHQAGEG
QEAVQLMSVHAAKGLEFDVVFITGLEQGLFPHENSINAGKDGLEEERRLMYVAVTRARQR
LYVSCAQTRMLHGQTRYCVPSSFLDEIPEQLLLKLNKKAAPAAAFPAFGSFGGGYAEPVA
AGGLRIGQTVEHAKFGIGVIVSTEGRGADARVQINFGGSGMKWLALEYAKLTPV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgcttgccaacttaaattcgccgcaacttcaggctgttaccttgccgccg
gtgcacgccctgatacttgccggcgctggcagcggtaagacccgggtgctgaccacgcgc
atcgcttggctcatgtccaccggtcaggtcgggccgcacggcgtactggccgtgaccttc
accaacaaggcggcgaaggaaatgacggcgcggctgtcgtcgctggtgccgatcaacacg
cggggcatgtggatcggcacttttcacggcctgtgcaaccgcctgctgcgggcgcattac
cgtgaggcggggctgccgcagaccttccagatcctcgattcggcggaccaactggcgatg
gtcaagcgtctgctcaagaacctcaatgtcgatgatgagaaatatccgccgcgcgagctg
tgccacttcatcaatgcccataaagagcagggtttgcgggcggcgcaggccgaggtttac
gacaactacacgcaaaaacgcgtcgagttgtacgccgaatacgagacccagtgcaaccgc
gaaggcgtcgtcgacttcgccgaactgttgttgcgctgctacgaattgctgcagcgcaac
gaacctttgcgcaaacactaccaggatcgcttccgttacatcctggtcgatgaggtgcag
gacaccaacaagctgcaatacgcctggctgaaactgctggcgggcggtggcgccgtggtt
tttgccgtcggcgacgatgaccagagcatctatgccttccgcggcgccgaggttggcaac
atgcgcgatttcgagcgcgattacgccggcgataatgtgatccggctcgaacagaactac
cgctcgcacggcaatatcctggcggcggccaacgccatcatcaagaacaaccgcgagcgc
ttgggcaagaatttgtggacggacgccggcgaaggcgagctgatccgggctttcgaggcg
tattcggatctcgacgaggcgcgtttcgtcgtcgaggaaatccgcgaactggtccgcgat
ggcatctcgccgacgcagatcgccctgctttaccgctccaacgcccagtcgcgcgtgctc
gaaaacgagcttttcacgaaaaacgtgccgtacaaggtctatggcggactgcgcttcttc
gagcggcaggaaatcaagcacgccctggcctatctgcggttgctcggcaatccggacgac
gacacggctttcctgcgcgtcgtcaatttcccgacccgcggcatcggcgcacgttcgctc
gaaaacctgcaggcgacggcgcatcagaccaattccagcctgtacaacgcggctgcctcg
ttgactggcaagtccgggcagacggtcggcgccttcatccgcttgatcgagcaactgcgc
gtcgagacggaaggcttgccgctgccggaaatggtcgagcacattatcgagaagtcgggt
ctggcccagcattaccggaccgacaaggaaggccaggaccggctggagaatctcgacgaa
ctgatcaacgccgccgccactttcatcgatgacgaaggcgccatcggcgaaggcggggcg
ctggtgtcattcctgaccctggcttccctcgaagccggcgaacatcaggccggtgagggt
caggaagccgtccagctcatgtcggtacacgccgccaagggcctggagttcgacgtggtt
ttcatcaccggcttggaacagggcctgttcccgcacgaaaattcgatcaacgccggcaag
gatggcctcgaggaggagcggcggctgatgtacgtggcggttacccgcgcccgccagcgt
ctttacgtttcctgcgcgcagacccgtatgctgcatggccagacgcgctattgcgtgccg
tcgagcttcctcgatgaaatccccgagcaactgttgctcaagctcaacaagaaagcggcg
ccggcggcggccttcccggctttcggctcgttcggcggcggctatgccgagccggtggcg
gccggcggcctgcgtatcgggcagaccgtcgagcacgccaagttcggtatcggcgtcatc
gtgtctaccgaagggcgcggcgccgatgcgcgcgttcagatcaatttcggcggcagcggc
atgaagtggctggcgctggaatacgccaagctgacgccggtttga
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