Ferribacterium limneticum: KI610_18480
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Entry
KI610_18480 CDS
T07599
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fle
Ferribacterium limneticum
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fle03016
]
KI610_18480
Enzymes [BR:
fle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KI610_18480
Transfer RNA biogenesis [BR:
fle03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KI610_18480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UCV18748
LinkDB
All DBs
Position
complement(3868525..3870426)
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AA seq
633 aa
AA seq
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MNVLFEEDGGFKAGSIMADNDSSLQVEMPTGKRSKIKAATVLLRFEKPSAAALLDQATPL
AEEIEAEFLWECVNDGEFSFLDFARDYYGHEPSPLEATAVLLAVHAAPVYFHRKGKGRFR
KAPADILAAALASLEKKRQQALTMEGWIVELREFRLPPEIGAMTDALLYAPDRNKPETKA
FETACAETGLTAAQMLFKCGAIKSPYFLHYRRFLHEQFPKGVAFPPLEAPKLPRDLPRAD
VRAFSIDDANTTEIDDALSVVRLPGIGSRIGIHIAAPGLAIAHGSPLDGIARARLSTVYM
PGNKITMLPDAVVQNYTLAGGVDCPAVSLYLTVNDSLEILSHESRLEMVHIAANLRHHEI
EPWFNAETINGPLPDQPFKDELVHLWHFANACEGRRGKPSAMQGINDYNFEIGGDLADPD
SCTVEISERKRGSPLDKLVAELMIVANSTWGGLLAERNVACLYRAQTQGKVRMTTSPLPH
EGLGVPQYAWMTSPLRRYCDMVNQWQLIACLKGETPAFAQKSAELFGAMRDFEQTYAAYA
DFQRQMERYWCLRWIQQRGLTEIDATVRREQSVKLDHLPLLLRVPSLPADLVAGQRVRLA
IENLDLLAPEVSCRFVSLLGENNLADATEDEEQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtattgtttgaagaagatggcggcttcaaggccggcagcatcatggccgacaac
gacagctcgttgcaggtcgaaatgcctaccggcaagcgcagcaagatcaaggccgcaacg
gtgttgctacgtttcgagaaaccgtcggcggcggccttgctcgatcaggccacgccgctg
gccgaagaaatcgaagcagaattcctctgggagtgcgtgaacgatggcgaattttcgttt
cttgattttgcccgtgattactacggacacgagcccagtccgctcgaagcgacggcggtg
ctgcttgccgtgcatgccgcgcccgtctatttccaccgcaaaggcaagggccgcttccgc
aaggcgcctgccgacattctcgcagctgctttggccagtcttgaaaaaaagcgtcagcaa
gcgctcacgatggaaggctggattgtcgagctgagagagttccgcctgccgccggaaatc
ggcgccatgaccgatgccctgctctacgcaccagatcgcaacaaacccgaaaccaaggcc
ttcgagacggcctgcgccgaaaccggcctgaccgcagcgcaaatgctcttcaagtgcggc
gccatcaagtcgccctacttcctgcactaccgccgtttcctgcacgaacagttccccaag
ggcgtggcctttccgccgcttgaggcgccgaagctgccgcgcgacctgccgcgcgccgat
gttcgcgctttctcgatcgacgacgccaacaccaccgaaatcgacgacgcgctgtcggtc
gtcaggctgcccggcatcggctcgcgcatcggcatccacatcgctgccccggggctggcc
atcgcgcatggctcgccgctcgacggcatcgcccgcgcccggctgtcgacggtctacatg
cccggcaacaagatcaccatgctgcccgacgccgtggtccagaactacacgctggccggc
ggcgtcgattgcccggccgtgtcgctctacctgacggtcaatgactcgctggaaatactg
agccacgaatcgcggctggagatggtgcacatcgccgccaacctgcgtcaccacgaaatc
gaaccgtggttcaacgccgaaacgatcaacggcccgctgcccgaccagccgttcaaggac
gaactggtgcacctctggcatttcgccaacgcctgcgaaggccggcgcggcaagccgtcg
gcgatgcaaggcatcaacgactacaacttcgaaatcggcggcgatctggccgatccggac
agttgcacggtcgagatttccgaacgcaagcgtggcagccccctcgacaagctggtcgcc
gaactgatgatcgtcgccaactctacctggggcggcctgctcgccgagaggaacgtcgct
tgcctgtaccgcgcccagacgcagggcaaggtccgcatgacgacttcgccgctgccgcac
gaaggcctcggcgtgccgcaatacgcctggatgacctcgccgctgcgccgttactgcgat
atggtcaatcaatggcagctgattgcctgcttgaagggcgaaacgccggcttttgcccag
aaatcggccgaattgttcggtgcgatgcgcgattttgagcaaacctacgccgcctatgcc
gattttcagcgccagatggagcgttactggtgcctgcgctggatccagcaacgcggtttg
actgaaatcgatgccaccgtgcgccgcgagcagagcgtcaagctcgaccatttgcctttg
ttgctgcgcgtcccatccctgccggctgatctggtggccgggcagcgcgtgcgtctggcc
atcgagaatcttgatctgctggcgccggaagtgagctgtcgtttcgtgagcctgcttggc
gaaaacaatctggccgacgccacggaggacgaagagcagtga
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