Flavobacterium sp. GSB-24: FLGSB24_01280
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Entry
FLGSB24_01280 CDS
T10693
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ2
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLGSB24_01280 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flf03019
]
FLGSB24_01280 (recQ2)
03400 DNA repair and recombination proteins [BR:
flf03400
]
FLGSB24_01280 (recQ2)
Enzymes [BR:
flf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLGSB24_01280 (recQ2)
Messenger RNA biogenesis [BR:
flf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLGSB24_01280 (recQ2)
DNA repair and recombination proteins [BR:
flf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FLGSB24_01280 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
TrmB
DnaD_N
MarR
BAMBI_C
Motif
Other DBs
NCBI-ProteinID:
BDU23384
LinkDB
All DBs
Position
137251..139146
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AA seq
631 aa
AA seq
DB search
MLGAQDILLKYWKHDSFRPLQKEIIDSVLEGQDTFAVLPTGGGKSICFQVPAMMQEGICL
VISPLIALMKDQVMNLHKREIKAIALTGGIHTEEIIDLLDNCQFGNYKFLYLSPERLQSD
WILERIKNLPINLIAIDEAHCVSQWGHDFRPAYLKISELKKFFPKIPFLALTATATPRVI
EDIRTQLELKNPRHFQQSFERKNIAYMVFEVEDKLYRTEQILKKNPQPSIIYVRNRKSCL
NISSQLQSLGFTATYYHGGLSSKEKDKNMQLWMSEQAQVIVATNAFGMGIDKDNVKTVIH
TQLPENLENYYQESGRAGRNGEKAFSVLLHNNSDATQTEQQFLSILPDKKFLKTMYVKLC
NYFQIAYGEGLDDSFSFKLNHFCNKYDFPTLKTYNALQFLNQQGIITMSQEFSEKINIQF
LIESKEVIRYMSLNPNDEEIILAILRTYPGVYEVKSNLNLGLIAKKSNRSEEQVTALLEK
LKEKEIIEYKSKNNDATILFNEVREDDHTINRVSKYLEKQNQVKKEQLLSVLHYIKDTKT
CKNRLVLDYFGEETNENCGICSYCITQKGKITEADSIADKILSLLKTASLTSREIENQIK
MDTKDIISALQELLENNHIIIQANNKYTLKS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctcggagcacaggatattcttctaaaatactggaaacacgacagttttagaccgttg
caaaaagaaattatcgattctgttcttgaaggacaggatacttttgctgtgcttccgacc
gggggcggaaaatcgatttgttttcaggtgcccgcgatgatgcaggaaggaatctgcttg
gtaatttctcctcttattgccttgatgaaagatcaggtaatgaatttgcataagcgagaa
attaaagcaattgctcttacaggaggtattcatactgaagaaatcatagatcttttggac
aactgccagtttggtaattataaattcctttatctttcgccagagcgtttacaatcggat
tggattttggagcgaattaaaaatcttcctataaatttaatcgctattgacgaggcacat
tgtgtttcgcaatggggacatgattttagacccgcctatcttaaaatctcggaattgaag
aaattctttccgaagattccttttttagctttaacggcgacagcaactcctagggttatt
gaagacattagaacgcagttagaattaaaaaatccgagacattttcaacaatcttttgag
cgaaaaaacattgcttacatggtttttgaagtcgaagataaattataccgcacggaacaa
attcttaaaaaaaatccgcagccttctataatatatgtccgaaaccgcaagtcttgtttg
aacatttcttcgcaattgcaatctttaggatttacggcgacgtattatcacggcggactt
tcgtctaaagaaaaagacaaaaacatgcagttgtggatgtctgagcaagcacaggttatc
gtggctacaaatgcttttggaatgggaattgacaaagacaatgttaaaaccgttatacat
acccagcttccagaaaatttagaaaattattaccaagaatctggaagagcgggacgaaat
ggcgaaaaagctttttcggttttactccacaataattctgatgcaacacaaacggagcag
cagtttttaagtatccttcccgacaagaagtttctgaaaacaatgtatgtcaaactttgc
aactattttcaaattgcttacggagaaggtttagatgattctttttcgtttaaactgaat
catttttgcaacaagtacgacttccctacccttaaaacatacaatgcattacaatttttg
aatcagcagggaattattaccatgtctcaggaattctcggaaaaaatcaacattcagttt
ttgattgaatccaaagaagttattcgatacatgagtttgaatcctaatgacgaggaaatt
atattggcaattttgcgaacttatccaggagtatatgaggtaaaatcaaatctgaatctg
ggattgattgctaaaaaatcgaatcgttctgaagagcaggttacagcacttttagaaaaa
ttaaaagaaaaagaaattatagaatacaagtctaaaaacaacgacgctactatattattt
aatgaagtccgcgaagacgatcatactataaatagagtttcgaaatatttagaaaaacaa
aatcaagttaaaaaagaacagcttttgtctgttttgcattatataaaagacactaaaacc
tgtaaaaacagattggttttggattattttggtgaagaaacgaatgaaaactgcggtatt
tgttcgtactgcattacccaaaaaggaaaaataacagaagccgattcgattgctgataag
attctatctttactaaaaactgcttctttgacttcgagagaaattgaaaaccaaataaaa
atggacaccaaagacattatttcggctcttcaggaattactcgaaaacaatcatattatc
atacaagcgaataataaatacactttaaaatcataa
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