Flavobacterium sp. GSB-24: FLGSB24_07350
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Entry
FLGSB24_07350 CDS
T10693
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FLGSB24_07350 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flf03400
]
FLGSB24_07350 (xth)
Enzymes [BR:
flf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FLGSB24_07350 (xth)
DNA repair and recombination proteins [BR:
flf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FLGSB24_07350 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BDU23991
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All DBs
Position
complement(812564..813325)
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AA seq
253 aa
AA seq
DB search
MKIISYNVNGIRAAINKGFIEWLQQANPDVICLQEIKATQDQIPVDDITAAGYPFQYYYP
ATKKGYSGVAILSKTKPNNIVFGTGIHHMDFEGRNLRADFDDVSVMSLYLPSGTNIERLD
HKFMFMDDFQTYVNELKLTIPNLIICGDYNICHEAIDIHDPVRNKTVSGFLPAERAWLDG
FMKSGFIDSFRHFNKDPHHYSWWSYRAGARGNNKGWRIDYNLVSESLENRLKRAVILPDA
MHSDHCPVLVEID
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatttcttataatgtaaacggaattcgtgctgcgataaacaaaggttttatc
gagtggcttcaacaagcaaatcctgatgtgatctgtcttcaggaaataaaagctacgcag
gatcaaattccagttgatgatataactgccgccggctatccttttcaatattactatcct
gcgaccaaaaaagggtacagcggagtagctattttatctaaaacaaaaccgaacaatatt
gttttcggaacaggaattcatcatatggattttgaaggacgaaaccttcgtgccgatttt
gatgatgtttcagtaatgagtttatatcttccgtctggaacaaatattgaaagactggat
cataaatttatgtttatggatgattttcagacgtatgttaatgagctaaaattgacgatt
ccgaatttgattatctgcggtgattataatatctgtcacgaggcaattgacattcacgat
ccagttcgtaataagacagtttctggatttcttcctgcagaacgagcttggttagatggt
tttatgaaatctggttttattgatagtttccgtcattttaataaagatccgcatcattat
tcttggtggagttaccgcgctggggctagaggaaataataaaggctggcgtatcgattat
aatctggtaagcgaatctttagaaaaccgattaaaaagagcggttatacttccagatgcc
atgcattcagatcattgtccggttttagtcgaaattgattaa
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