Flavobacterium sp. GSB-24: FLGSB24_16920
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Entry
FLGSB24_16920 CDS
T10693
Name
(GenBank) bacteriocin cleavage/export ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf02010
ABC transporters
flf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FLGSB24_16920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FLGSB24_16920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
flf01002
]
FLGSB24_16920
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flf02000
]
FLGSB24_16920
Peptidases and inhibitors [BR:
flf01002
]
Cysteine peptidases
Family C39
FLGSB24_16920
Transporters [BR:
flf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FLGSB24_16920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_21
AAA_16
CbiA
nSTAND3
AAA_23
SRP54
NACHT
AAA_30
AAA_24
MobB
DUF2205
DUF87
Motif
Other DBs
NCBI-ProteinID:
BDU24948
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All DBs
Position
1927612..1929780
Genome browser
AA seq
722 aa
AA seq
DB search
MASIKIKQHDIKDCGAACLVSIGNHYKVNLPIARIRQYAHTDKRGTNVLGIIEAAEKMGF
TAKGVKGGIDSLDKIPMPAIAHVFIKQQLQHYVVIYRVEKSKVENQSKITVMDPGVGKME
VYTFEEFQKIWSGVLILFAQNDSFRTYDEKTSPLTRFWHLIQPHKTILIQALFGAIIFTV
LGLAMSIYIQKITDYILVEGNRKLLNLLSVCMLGVILLQGFVGSQKSIFVLKTGQLIDAK
LILGYYKHLLHLPQRFFDTMQIGEITSRINDAVKIRSFINEVAIDMIVNVFIVIFSFALM
FTYHWKLALIILGVVPFYGLIYFILNRFNRKVERSIMENAAELQTQLVESVTHIRTVKEF
GIEEFSNLKTENKFVKLLFTAYKSGLNSIFSGTSTQFLASLFTVILMWVGSGYVIDGAIT
PGELFSFYALVGYFTSPVASLIGMNKTAQNALIAADRLFEIMDLEREKTENKIEMQRENI
GDIKFENVSFRYGSRMEVFKGFNAVFRKNETTAIVGESGSGKTTLISLLQNLYSINEGKI
YLGDYDTQFIHYKSLRQLIGVIPQQLNLFSGNIIENIALGDSFPNIQRILDLSKQLGIIE
FVEKLPNGFETQIGENGAMLSGGQKQRIAIARALYKDPEILLMDEATSALDTSSEMIVRE
TISNFKKQGKTIIIIAHRLSTISNADKIMVMQNGEIVESGSHHVLLEKKEKYFDLWKKQS
LV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatcaaaataaaacaacatgatattaaagattgtggcgctgcttgtcttgta
tctattggaaatcattacaaggttaatctcccaatagcacgaattcgccaatatgcacat
acagataaacgaggcaccaatgttcttggcattattgaagcagctgagaaaatgggtttt
acagccaaaggagtaaagggaggaatagattctttagataaaataccaatgcctgcaatt
gcgcatgtttttataaagcaacagctgcaacattatgtggtaatttacagggttgaaaaa
tctaaagttgaaaatcagtccaaaattacggtgatggatccaggtgtagggaaaatggaa
gtgtacacttttgaagagtttcagaagatctggtcaggtgttttaatactttttgcacaa
aacgatagctttagaacgtacgatgaaaaaacatcaccgttgactcgattttggcacctg
atccagcctcacaaaactattttaattcaggcattgtttggcgcaataatatttaccgtt
ttaggattggcaatgtctatttatatccagaagattacagattatattttggtagaaggc
aatcgcaaacttcttaatttgctaagcgtttgtatgcttggtgtaattttgctgcaagga
tttgttggttctcaaaaaagtatttttgttttgaaaacgggacagctaatagatgctaag
ttaattttaggttattataaacatttattgcatttgcctcagcgcttttttgacacaatg
caaataggggaaattacatcaagaattaatgatgcagtcaaaatcagatcgtttattaat
gaagtagcaattgatatgattgtaaatgtttttattgtcattttttcattcgccttgatg
tttacctatcattggaaattagctttaattattttaggggtagtacctttttatggttta
atttatttcattctcaataggttcaataggaaagttgaacgaagcataatggagaatgca
gccgagcttcagactcaattggttgaaagcgtcacgcatataagaacagttaaagaattt
ggaatagaagaattttcaaatctaaaaaccgaaaataaatttgtcaaacttttgtttaca
gcttataaatcaggattaaatagtattttttcaggcacttctacacaatttttggcttct
ttatttacagtaattcttatgtgggtaggatcaggttatgtaattgatggtgctattacg
ccaggcgaattattctctttttatgctttggtaggctattttacttcgcccgtcgcgtct
ttaatagggatgaataaaacagcgcaaaatgctcttattgcagctgacaggctttttgaa
atcatggatttggagcgtgaaaagacagagaataaaattgaaatgcaaagagaaaatatc
ggagatataaaatttgaaaatgttagttttagatatggttcaagaatggaagtttttaaa
gggtttaacgctgtatttagaaaaaatgaaacaacagcaatagtaggggaaagcggcagt
ggaaaaacaacattgatttcattattgcaaaatttatattcaataaatgaagggaaaata
tatcttggggattatgatactcaatttatacattataaaagtttgagacagcttattgga
gttattccgcagcagctgaatttattctcgggaaatattatagaaaatattgcattaggg
gattcttttcctaacattcaaagaatattggatttgtcaaagcaattgggaattattgaa
tttgttgagaagttgcctaatggttttgaaacccaaattggtgaaaacggagcaatgcta
tctggagggcagaagcaaagaatcgcgattgcaagagctttgtataaagatcctgaaata
ttattaatggatgaagccacttcagccttagatacaagttctgaaatgattgttagagaa
actataagcaactttaaaaaacaaggtaagactatcattattatagctcaccgtttaagt
acaatttcaaatgctgacaaaattatggtaatgcagaatggtgaaattgtagaatcaggc
agtcatcatgttttacttgagaaaaaagaaaaatacttcgacttgtggaaaaaacagagt
ttagtttaa
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