Flavobacterium sp. GSB-24: FLGSB24_17940
Help
Entry
FLGSB24_17940 CDS
T10693
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf03030
DNA replication
flf03430
Mismatch repair
flf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FLGSB24_17940
03430 Mismatch repair
FLGSB24_17940
03440 Homologous recombination
FLGSB24_17940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flf03032
]
FLGSB24_17940
03400 DNA repair and recombination proteins [BR:
flf03400
]
FLGSB24_17940
Enzymes [BR:
flf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FLGSB24_17940
DNA replication proteins [BR:
flf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FLGSB24_17940
DNA repair and recombination proteins [BR:
flf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FLGSB24_17940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
BDU25050
LinkDB
All DBs
Position
complement(2053363..2054748)
Genome browser
AA seq
461 aa
AA seq
DB search
MRNTEYAIVDIETTGGNASGSRITEIAIIIHDGKNVIDRYETLVNPEKEIPLSIFGLTGI
NNEMVSNAPIFDDISEKVLEMLTDRIFVAHNVNFDYSFVRHQLEQAGFKWTARKLCTVRA
ARKIKPGLGSYSLGNLCNSLNICLENRHRAGGDADATAILFSLLLEWDDAGEINKMIKKT
SEDQRLPPNLPPEDFNNLPEKPGVYYFYNQQKKVIYVGKAINLKKRVASHFSGHKINSQR
QHFLRDIHGISFEVCATELMALLLECTEIKKLWPTYNRALKRFEAKFGIYQYEARNGYKY
LAVGKLTKFQTCIHEFNSLYNAINLLRELSEQFEIDQRFCKYSRPEDGELFQNNDIKSLP
DALLHNQQVDNAIDFLLNNRPTFAIIDKGRTKDERSCIWIENGHFYGMGHIPTDVSITDP
SEVKNYVTPYKSNQYIVHLIFAYAEKYPGKVFFKKQFLNQE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatacggaatatgccatagtcgatattgaaaccacaggcgggaatgccagtggc
agccgcattacagaaattgccattattattcatgatggtaaaaatgtaattgaccgttat
gaaacgcttgtaaaccccgaaaaagaaataccactttctatttttggtttaacagggatt
aataacgaaatggtgtccaatgcacctatttttgatgatatttcggagaaagtactcgaa
atgcttaccgatcgtattttcgtcgcgcataacgtcaacttcgattattcatttgttcgt
catcaattggaacaagctggttttaaatggactgccagaaaattgtgtaccgttcgcgca
gcacgaaaaattaaaccaggattgggatcgtatagtttagggaatctgtgtaactcctta
aatatctgtttagaaaacaggcaccgcgccggcggagatgcagatgctactgctatattg
ttttctttattattggaatgggatgatgcaggcgagatcaacaaaatgatcaaaaaaaca
tctgaagaccagcgtttgccaccaaatttacctccagaagattttaataatttacccgaa
aaaccaggcgtttattatttttataatcagcagaaaaaggtgatttatgttggaaaagcg
attaacttaaaaaaacgcgttgcttctcattttagcgggcacaaaattaattcgcaaagg
cagcattttctgcgtgatattcacggaatttcgtttgaagtctgcgcaaccgaattaatg
gctttgttattagaatgtaccgaaatcaagaaactctggccaacttacaatagagcatta
aagcgctttgaggcgaaatttggaatttaccagtatgaagcaagaaacggatataaatat
ttagccgttggaaaactaaccaaatttcagacttgtattcatgaatttaatagtttgtat
aacgctataaatttactgagagagctgtctgaacaatttgaaattgatcaaagattctgc
aaatattccagacctgaagatggggagctttttcagaataatgatataaaaagtctgcct
gatgccttgcttcataatcagcaagttgataatgcaattgattttctgttaaacaaccgt
cccacttttgccattattgataaagggagaaccaaagacgaacgaagttgtatttggatt
gaaaacggtcatttttatggtatgggacatattccgacagatgtttcgattacagatcca
tcagaagtaaaaaactatgttacgccctataaaagcaatcaatacattgtgcatttgatt
tttgcttacgcagaaaaatatccaggtaaagtattctttaagaaacagttccttaaccaa
gaatag
DBGET
integrated database retrieval system
