Flavobacterium sp. GSB-24: FLGSB24_24020
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Entry
FLGSB24_24020 CDS
T10693
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
flf Flavobacterium sp. GSB-24
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
flf03110
]
FLGSB24_24020 (clpA)
Chaperones and folding catalysts [BR:
flf03110
]
Heat shock proteins
HSP100
FLGSB24_24020 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
AAA_18
RuvB_N
IstB_IS21
TniB
AAA_7
Zeta_toxin
AAA_14
AAA_3
Torsin
RsgA_GTPase
UVR
ATPase_2
DUF815
Roc
TsaE
AAA_25
DNA_pol3_delta2
DUF87
Motif
Other DBs
NCBI-ProteinID:
BDU25658
LinkDB
All DBs
Position
complement(2812635..2815181)
Genome browser
AA seq
848 aa
AA seq
DB search
MDDNFSPRVKDVITYSKEEALRLGHDFIGTEHLMLGILRDGNGKAIHILNNLAVDLDHLR
RKVEILSPANLSVEVNAEKKNLHLTRQAERALKTTFLEAKVFQSSSISTAHLLLCILRNE
NDPTTKLLNKLKIDYDVAKEQYLNMTPNEEEFLENLPRNESYNDDSGQDDSLKESSFNNP
ANKSNKKSKTPVLDNFGRDLTEMAEEGKLDPVVGREKEIERVSQILSRRKKNNPLLIGEP
GVGKSAIAEGLALRIIQKKVSRILFHKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEK
NDDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGAL
ERRFQKVIVEPTSVEETIAILNNVKDKYEDHHNVTYTQEAIEACVKLTNRYMSERFLPDK
AIDAMDEAGSRVHITNIDVPKQILDLERQLEEVRELKNMVVKKQKYEEAAKLRDDEKRIE
KDLATAQEQWEEDSKNNRIEVTEDNVADVVSMMTGIPVNRIAQTESNKLAQLPELIQNKV
IGQNEAVLKIARSIQRNRAGLKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDALV
RIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKPYCVVLLDEIEKAHPDVFNMM
LQVLDDGYLTDSLGRKIDFKNTIIIMTSNVGARQLKDFGQGVGFGTAAKVAQADENSKSI
IENALKKTFAPEFLNRIDDVIVFNSLEKADIDLIIEIELKKLYSRIAELGYKLSLTDKAK
AFIAEKGFDKQFGARPLKRAIQKYVEDLLAEEIITSKIHSGDEIMMDLKDDSQELSVEIH
KAEEPTNQ
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttttcaccaagagtaaaagatgttattacatacagcaaagaagaggct
ttacgtttaggccacgactttattggtacagaacatctaatgctgggcattttaagagat
ggtaacggaaaagctattcatatacttaataacctagcagtcgatttagatcatttacgc
agaaaagtagaaatactaagccctgccaacctgagcgttgaagtaaatgcagaaaagaaa
aaccttcatcttacccgacaggcagaaagagccctgaagaccacttttctagaagcaaaa
gtatttcaaagttcatcaattagcacggcccacctgctgttatgtatcttgagaaacgaa
aacgatccaacaaccaagctattgaataaacttaaaatagattatgacgtagctaaagaa
cagtatttaaatatgactccaaacgaagaagaattcttagaaaacttgccaagaaacgaa
tcgtataacgacgattcaggacaagatgacagtcttaaagaaagtagttttaataatccc
gccaataagtcaaacaaaaaatctaagactccagttttagataattttgggagagattta
acagaaatggccgaagaagggaaattagacccagttgtaggacgcgaaaaagaaattgag
cgtgtttcgcaaattctaagccgtagaaagaaaaacaatccgcttcttattggagaacct
ggggttggtaaatctgctatcgcagaaggactggctttacgtattattcaaaagaaagta
tcacgtattcttttccacaaacgtgttgtaactcttgatttagcaagtttagttgctgga
acaaaatatagaggacaatttgaggaaagaatgaaagccgtaatgaacgagcttgagaaa
aacgatgatattattctttttattgatgaaatccatactattgtaggtgctggaggagca
acaggttcgcttgatgcttcaaacatgttcaaacctgctttagcaagaggagaaattcaa
tgtattggtgctactactcttgatgagtacagacaatatattgaaaaagatggtgcttta
gaaagacgtttccaaaaagtaatcgttgaaccaacttctgttgaagaaacaattgcaatt
ttgaataacgtaaaagataaatatgaagatcaccacaacgttacctatactcaagaagca
attgaagcttgtgtgaagctgacaaacagatatatgtctgagcgtttcctaccagacaaa
gcgatcgatgctatggatgaggctggatcacgtgtgcacattacgaatatcgacgttccg
aaacaaattttggatttagagcgtcagttagaagaagttcgcgagcttaaaaatatggtt
gttaaaaaacaaaaatatgaagaagctgctaaacttcgcgatgatgaaaaacgtatagaa
aaagaccttgccactgcacaagaacaatgggaagaagattctaaaaacaacagaattgaa
gttacagaagataatgtagcggatgttgtttcgatgatgactggaattcctgttaataga
attgcacagacagaaagcaataaattagctcaattacctgaattaattcaaaataaagta
attggtcaaaatgaggctgttcttaaaattgctcgttctattcaacgtaacagagctgga
cttaaagatcctaacaaaccaattggttcattcatcttcttaggtcagactggtgttggt
aaaacacagttggccaaagtattagcaaaagaattatttgattctgaagatgctttagtt
cgtattgatatgagtgaatacatggagaaatttgcgatatctcgtttagttggagcgcct
ccaggatacgttggttacgaagaaggcggccaattgacagaaaaagttcgtagaaaacca
tattgtgttgtacttttagatgagatcgaaaaagcacatccagatgtgtttaatatgatg
cttcaagttttagatgacggatatttaacagatagtttaggtcgtaaaattgactttaaa
aacactattattatcatgacatctaatgttggtgcacgccaattgaaagatttcggacaa
ggtgtaggattcggaactgctgcaaaagttgctcaagccgatgaaaactcaaaaagcatt
atcgaaaatgcattgaagaaaacttttgctcctgaattcttaaacagaattgatgacgta
attgtattcaacagtttagaaaaagctgatattgatttgattattgaaatcgaattgaaa
aaactgtattctcgtattgctgaacttggttacaaattaagcttaacagacaaagccaaa
gcatttattgctgaaaaaggttttgacaagcagtttggagctagaccgctaaaaagagca
attcagaaatatgttgaagatttgttagccgaagaaatcatcacttcgaaaatacattca
ggtgacgaaatcatgatggatctaaaagatgattcgcaagaactttcagtagaaatccat
aaagccgaagagccgactaatcaataa
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