Flavobacterium sp. GSB-24: FLGSB24_27190
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Entry
FLGSB24_27190 CDS
T10693
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
flf Flavobacterium sp. GSB-24
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flf03032
]
FLGSB24_27190
03400 DNA repair and recombination proteins [BR:
flf03400
]
FLGSB24_27190
Enzymes [BR:
flf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FLGSB24_27190
DNA replication proteins [BR:
flf03032
]
Prokaryotic type
DNA Topoisomerases
FLGSB24_27190
DNA repair and recombination proteins [BR:
flf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FLGSB24_27190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Msg2_C
Motif
Other DBs
NCBI-ProteinID:
BDU25975
LinkDB
All DBs
Position
3197640..3198737
Genome browser
AA seq
365 aa
AA seq
DB search
MNAAAKKEVLMNQLIKTPHLVIEKLDLEYINDHQLTIVRCREGENFVYKKNGRSLKNKNE
IKRINSLVLPPAWENVRITDVTNGHLQAVGIDLKNRKQYRYHPKWNLLRNQTKFYKIAEF
GAKLPAIRKQVDIDLENKEWSKEKVIALVIRLMEETHIRIGNEKYAKDNKSYGLSTLRKR
HININRNSLRFEFVGKKGKQHTITTRNKQLIKLVSRCEEIPGWEVFKYYDKNGERKVLDS
HMVNEYLHNISGEYFSAKDFRTWAASIIFFESLMEIGVTSDEKEAKKNVVTAFDLTAEAL
GNTRKVCKDYYVHPLLISTYEDGSIQKYFDLAKKSRSTRKYFTKSEIAFSELIQNYEINL
ESSCS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcggccaaaaaagaagttttaatgaatcagttaattaagactccacattta
gtgattgaaaaattagatttggaatatattaatgatcatcagctgacaattgttcgatgt
cgtgaaggagaaaatttcgtttacaaaaaaaatggaagatctctaaaaaataaaaacgaa
ataaaaagaattaatagtttggtgcttccgccggcatgggaaaatgttcgaattacagat
gttacaaacggacatttacaggctgttggaatagaccttaaaaatagaaaacaatatcgc
tatcatccaaaatggaatctgcttagaaaccaaactaaattttacaaaattgctgagttt
ggagctaaacttccagctattagaaaacaagttgatattgatttagaaaataaagaatgg
tcgaaagaaaaagttattgctttggtcattcgtttgatggaagagactcatattagaatt
ggaaatgaaaaatatgccaaagacaataaatcatatgggctttcaactttaagaaaacgt
catattaacatcaatagaaattcgcttcgatttgaatttgtcggcaaaaaaggcaagcag
catacgattacaaccagaaacaaacaattgataaaactggtaagccgatgcgaagaaatt
ccaggctgggaagtttttaaatattacgataaaaacggagaaagaaaagtacttgacagc
catatggtaaacgaatatctgcataatatttcaggtgaatattttagtgcaaaagacttt
agaacatgggcagcgtcaattattttctttgaaagcttaatggaaatcggcgttacttct
gatgaaaaagaagctaaaaaaaatgtggttaccgcatttgatttaacggcagaagcatta
ggaaacactagaaaagtctgtaaagattattacgttcatccgcttttaatttcgacttat
gaagatggctcgattcaaaagtattttgatttagctaaaaaaagccgaagtacgagaaag
tattttacgaaatcagaaattgcattttctgagttaatccaaaattatgagattaattta
gaatcgtcatgcagttaa
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