Flavobacterium sp. GSB-24: FLGSB24_30240
Help
Entry
FLGSB24_30240 CDS
T10693
Symbol
dnaE_2
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf03030
DNA replication
flf03430
Mismatch repair
flf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FLGSB24_30240 (dnaE_2)
03430 Mismatch repair
FLGSB24_30240 (dnaE_2)
03440 Homologous recombination
FLGSB24_30240 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flf03032
]
FLGSB24_30240 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
flf03400
]
FLGSB24_30240 (dnaE_2)
Enzymes [BR:
flf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FLGSB24_30240 (dnaE_2)
DNA replication proteins [BR:
flf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FLGSB24_30240 (dnaE_2)
DNA repair and recombination proteins [BR:
flf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FLGSB24_30240 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
BDU26280
LinkDB
All DBs
Position
complement(3546253..3549306)
Genome browser
AA seq
1017 aa
AA seq
DB search
MYLNCHSFHSLRYGTIPLDDLIRQTADCAVTAAALTDINTVTGIYDFIKGCEALGIKPLV
GIEFRCRHKFRYIGLAKNASGLAQMNRFLTDHNFSGNPLPEKAPAFESVYFIYALENAPA
ELGENEYIGIQPDQLGRLFMPELKKRIFKMVVLQPVVFRTKREYNLHRILRAVDLNELLS
KLDPDDCCRKSDMMIPESELIGLYKDYPEIIQNTRYIIDHCNFKYDFESPRNKKHYTKNK
KGDIALLTTLAEEGLVWRYGRHNAEAKARVEKELKVINDLEFSGYFLITWDIIRYSSSRG
FLHIGRGSGANSIIAYCLGITDICPLELDLYFERFLNENRKSPPDFDIDWSWKERDVILK
YIFDRYGYENVAFCGTNVEFKYRSIFREVGKVFGLPKDELDMLAKNPMKLHQTNSIVKLV
QQYGLMLEKYPNMRSMHSCGILISEEPLTNYTPLEMPPKGFPIVLFDMHTAEDIGFDKFD
ILSQRGIGHIDDTVKIIEQNRGIRINIRDTRISKNEQSTNVYLAEGRTIGCFYIESPAMR
GLLRRLKCDNYKTLVAASSIIRPGVAQSGMMKEYIFRHNNPSRFEYFHPVFEKELGETYG
IMVYQEDVIKIALHYGGLSAADGDILRRAMSGKGRSKAALQKVKDDFFIAAAAKGHPEAL
SQEIYRQIESFAGYSFCKAHSASYAVESYQSLYLKVHYPIEFMVAVINNQGGFYRTEIYV
HEARMAGAVIHTPCVNKSGYETALYGSDIYLGFMHLQGLDSKLSQFIAFERERNGVYKSL
EDFINRVPMGIENVKVLIFIGAFRFTGKTKNQLLVQVSLLMNNFKPENRGLMLIEQPAKE
FKLPVLERSVFEDAFDEIELLNFPVSCTVFDLLQTRHRGDVMVRDLLKYHKKQVRMLAYL
ISTKQVPTKRGNMYFGTWIDNEGAYFDTAHFPDSLANNPFQGGGCYLLLGTVEIDYHFPT
ITISRMAKMPFIPDPRYSDSEKRYTTQHNIKQDISSTHRQPYPQEHEINLPRHRMKF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcaactgccactcttttcattcgctgcgctacggcaccattccgctggatgat
ctgataagacagacagcggattgcgctgtcacggcggcagccttgaccgacatcaatacc
gttacagggatttatgattttataaaaggctgcgaagctttaggcataaaaccgcttgtt
gggatagaattccgctgcaggcataaatttcgctatatcggtctggccaaaaatgcttca
ggacttgcccagatgaaccgttttctgaccgatcataatttcagcggaaatcccctgccg
gaaaaagccccggcttttgaatcggtttattttatatatgctctggaaaatgcgccggca
gagctcggcgaaaatgaatatatcggcatccagcctgaccagctcggcaggctttttatg
cctgagcttaaaaaaaggattttcaaaatggtcgtgcttcagccggtggtattccgcact
aaaagggaatacaacctgcataggatcctgcgcgctgttgacctcaatgagcttctgtcc
aagctcgatcctgatgactgctgcagaaaatccgatatgatgattcccgaatcggaactt
atcgggctgtataaagattatcccgagatcatccagaatacacggtacatcatcgatcac
tgtaattttaagtacgatttcgagagtccaagaaacaaaaagcattataccaaaaataaa
aagggggatattgcccttttgaccactctggccgaagaaggtctggtctggcgttacgga
agacataacgccgaagcaaaagcgcgtgtggagaaagagcttaaagtcatcaatgatctt
gaattcagcggctatttcctcattacctgggacatcatacgctacagcagcagccgcggt
ttcctgcatatcggaaggggttcgggcgctaacagcattattgcctactgtctgggaatt
acggacatctgccctttggagcttgacctgtatttcgagcgctttctgaatgaaaaccgc
aaaagccctcctgattttgatatcgactggtcgtggaaagagcgtgatgtgattctgaaa
tacatcttcgaccgctacggttatgagaatgtggctttctgcggcaccaatgtggaattc
aaataccgctcaattttccgcgaggtcggcaaggtattcggactgcccaaagacgagctg
gatatgctggcaaaaaatcccatgaagctccaccagaccaactccattgtcaaactggtg
cagcaatacggtctgatgctcgaaaaatatcccaatatgagaagcatgcattcctgcgga
atcctgatctcggaagagccgctgaccaattatacgccactggaaatgccaccgaaagga
ttcccgatagtgctctttgacatgcatacggcagaggatatcggttttgataaatttgac
atcctcagccagagaggcatcgggcatattgatgacacggtaaaaataattgagcagaac
agaggaatacgcattaatatccgcgacacgagaatatcaaaaaacgaacagtccacaaac
gtgtatcttgctgagggcaggacaatcggatgcttttacatcgaaagcccagcgatgcga
ggacttttacgccgtctgaaatgcgataattataaaactcttgtggcggcatcatcgatt
atccgcccgggagtggcgcagtcgggaatgatgaaggaatacatcttccgacataacaac
ccgtcaagatttgaatattttcatcctgtttttgaaaaagagctcggagaaacctatggc
attatggtgtatcaggaggacgtgataaaaattgccctgcattacggcgggctctcagcc
gccgacggcgatatcctcagacgtgccatgtcgggcaagggacgctcaaaagccgcactt
cagaaagtaaaggatgatttctttattgcagccgcggcaaaagggcatcccgaagcgctg
agccaggaaatctaccgccagatcgaatcctttgcaggctactctttctgcaaggcgcat
tctgcctcctatgccgtggaaagctaccagagcctatatctgaaagtgcactaccctatt
gaatttatggttgccgtcataaataatcagggaggattttaccgtactgaaatctacgtg
cacgaagccagaatggccggcgctgttatccataccccctgcgtgaataaaagcggatat
gaaaccgcgctttacggcagcgacatttatctgggctttatgcacctgcagggactggat
tccaaactctcgcagttcatcgcttttgagcgtgagagaaacggcgtgtacaagtcactg
gaggatttcataaaccgtgttcctatgggcatcgagaatgtaaaggtgcttatttttata
ggcgctttccgctttacgggaaaaaccaaaaatcagctgctggtgcaggtaagccttttg
atgaataatttcaaacctgaaaaccgcgggcttatgctcattgaacagcctgccaaagaa
ttcaaactgcctgttctggagcgctcggtatttgaggatgcctttgatgaaattgagctt
ctgaattttcccgtttcctgcaccgtttttgatctgctgcagacaagacaccgaggggat
gtgatggtgcgcgacctcttaaaataccataaaaagcaggtacgtatgctggcgtatctt
atttcaaccaagcaggtgccgaccaaaaggggcaatatgtatttcggaacatggatcgat
aatgagggagcctattttgatactgcacatttccctgatagtctggcaaataatccattt
cagggaggaggctgctacctgcttttgggaaccgtggaaattgactatcatttcccaacc
atcaccatttccagaatggcgaaaatgccttttatccctgatccaagatattcggactcg
gaaaaaaggtataccacgcagcataatatcaaacaggatatcagcagcacccatcgccag
ccttatccgcaggagcatgaaattaatctaccgcgccacagaatgaaattttga
DBGET
integrated database retrieval system
