KEGG   Flavobacterium sp. GSB-24: FLGSB24_33330
Entry
FLGSB24_33330     CDS       T10693                                 
Symbol
helX
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
flf  Flavobacterium sp. GSB-24
Brite
KEGG Orthology (KO) [BR:flf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:flf03400]
    FLGSB24_33330 (helX)
Enzymes [BR:flf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FLGSB24_33330 (helX)
    5.6.2.6  RNA 3'-5' helicase
     FLGSB24_33330 (helX)
DNA repair and recombination proteins [BR:flf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FLGSB24_33330 (helX)
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: BDU26589
LinkDB
Position
3898532..3900991
AA seq 819 aa
MNREQLFTIASNWFENQGWKPFPFQTQTWTAFLQGKNGLLNAPTGSGKTYALWLPIILNY
IKENPNYKTKQTPGLKAIWITPLRSLSVEIKQAAERVINDLDIKMTVGIRSGDTSAAERA
KQKGRMPDLLITTPESLQLLLASKGYESTFKNCSSIVIDEWHELLGTKRGVQVELGLSRL
KTIAKNIRIWGISATIGNLQQAQEVLLGVDSEAYHNSVLIKAVINKKIKVVSIIPEKMDT
YPWRGHMGLHLIDEAAKIVKASKTTLIFTNVRSACEIWYQRLLEKYPEFAGEMAMHHGSI
DRETRQWVENAIRNEELKVVVCTSSLDLGVDFAPVESIIQVGGPKGVARFMQRAGRSGHQ
PGKESVIYFLATHAIELIEASALKKAVENSVIEDRVPYLNSWDVLVQYLNTLAVSDGFFP
DEIFKEVRGTFSYQTITKENWNWILNFITNGSQSLHAYDEFKKVEIEEDGRYKINNRMIA
MHHRMQIGTIVGDAVLNVKYMSGGYIGTIEEWFISKLKPGDTFIFAGKKLELFRIRNMQV
LVKKASPKKESKIASWMGGRMALSAQMSELLRQELYRANTDNLSPELKALQPLFNRQRKE
SIVPDNNEFLIETFKSREGYHAIFYPFEGRFVHEALASLLAYRISLLQSISFSLAYNDYG
FELLSDQEIDIEAVLDNNLLSTEYVHHDLQKSLNSTEMARRKFRDIAVIAGLVFTGFPGK
MVKTKHLQSGSQLLFEVFRDFEPDNLLLHQAYRETFEHQLEEGRLILALERIANQKIVWK
QCLKPTPFSFPIITDRLREKLSSETLAERIQKMTASYMK
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaatagagagcagttatttacaattgccagcaattggtttgaaaatcagggctggaaa
ccttttccatttcaaactcagacatggactgctttcctgcagggaaaaaatggcttgcta
aatgcgccaaccggaagcggaaaaacgtatgcgctctggcttccaattattttaaattat
attaaagaaaatccaaactataaaacgaaacaaactcctggtttaaaagctatttggatt
acgcccttgcgctctttatcagtcgaaatcaaacaagctgcagaaagagttataaatgat
ttagatattaaaatgacggttggaatccgttctggagacacttccgcagcggaaagagcc
aagcaaaaaggaagaatgccagatttattaattacaactccagaaagcctgcaattgctt
ttagcctcaaaaggatacgaatctacttttaaaaactgtagttcaattgtaattgatgaa
tggcacgaattactgggaacaaagcgtggcgttcaagtagaattaggtttatcgagactc
aaaacaattgcgaaaaacattcgcatttggggaatttcagcaacaattggcaacttgcag
caagctcaggaagttttgctcggtgtcgattctgaggcttatcataattctgttttaatc
aaagctgtaattaataaaaaaataaaagttgtctcgattattccagagaaaatggatact
tatccttggcgaggacacatgggcttacatttaattgatgaagcagcaaaaattgtaaaa
gccagtaaaacaacacttatttttacgaatgttcgttcggcatgcgaaatttggtatcag
cgattactagaaaaatatcctgaatttgctggcgaaatggcaatgcatcacggaagtatt
gatcgagaaaccagacaatgggttgaaaatgccattcgaaatgaagaattaaaagtcgta
gtttgtacttctagtttagatttgggagttgactttgctccagtcgaatctattattcag
gtgggcggcccaaaaggtgttgcacgatttatgcagagagcaggacgaagcggtcatcag
cctggaaaagaaagtgttatttactttcttgccacgcatgctattgaacttatagaagct
tctgctttgaaaaaagcagtagaaaacagcgtaatcgaagatcgtgttccgtatttaaac
agttgggatgttttggttcagtatctcaatactttagcggtttctgacggtttctttcca
gatgaaatttttaaagaagtacgaggaacattcagctaccaaaccattacaaaagaaaac
tggaactggatcttgaatttcattaccaacggaagtcagagtctgcacgcttacgacgaa
ttcaaaaaagtagaaattgaagaagacgggcgctataaaattaataaccgaatgattgca
atgcatcaccgaatgcagattggaacaattgtaggcgatgctgttttgaatgtaaaatat
atgagcggcggttatattggaactattgaagaatggtttatttcgaaattgaaacccggc
gatacttttatttttgcaggaaaaaaactggaattattccgaattcgaaatatgcaggtt
ttggttaaaaaagccagtccaaaaaaagaatcaaaaattgccagctggatgggcggacgc
atggcgttatctgcacaaatgagtgaattgcttcgtcaggaactatatcgagccaatacc
gataatctttcacccgaattaaaagcgcttcagccattgtttaatagacagcgaaaggaa
tcgattgttcctgataacaatgaatttttgatagaaacttttaaaagccgagaaggttat
catgcgatattttatccgtttgaaggacgttttgtacacgaagcgctggcaagtttattg
gcctacagaattagtttactgcaatcgatcagtttttctttggcttataatgattacgga
tttgaattgctttctgatcaggaaattgatattgaagcggtattggataacaatctatta
tcaacagaatatgtacatcatgatttgcagaaaagtttaaattcgacggaaatggcaaga
agaaaatttcgagatattgccgtaattgcaggattggtttttacaggttttcctggaaaa
atggtcaaaacaaaacatttacaaagtggttctcaattgctgtttgaagtattcagagat
tttgagcctgataacttattgctgcatcaagcgtatcgtgagaccttcgaacatcagctg
gaagaaggacgtttgattttggctttggaacgaattgccaatcaaaaaatagtttggaaa
caatgtcttaaacctactccgtttagttttcctataattacggaccgtttaagagaaaag
ctttcaagcgaaacattagcggagagaatccaaaaaatgaccgcttcttacatgaaataa

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