Flavobacterium sp. GSB-24: FLGSB24_33660
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Entry
FLGSB24_33660 CDS
T10693
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf03420
Nucleotide excision repair
flf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FLGSB24_33660 (pcrA)
03430 Mismatch repair
FLGSB24_33660 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flf03400
]
FLGSB24_33660 (pcrA)
Enzymes [BR:
flf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLGSB24_33660 (pcrA)
DNA repair and recombination proteins [BR:
flf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FLGSB24_33660 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FLGSB24_33660 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDU26622
LinkDB
All DBs
Position
3950524..3952866
Genome browser
AA seq
780 aa
AA seq
DB search
MNDPILDNLNPNQLQAVKTTEGYVRVIAGAGSGKTKALTSRFAYIVDRLGINSSNILCVT
FTNKAAQEMKKRVKALIGDNYDVSFITTYHGFCVRFLREEINKIHYPKNFIILDAEDQKS
ILRDVFTELQINSKHLTFKQVLRFISKQKSTSNYLGYILENKSFEPDESDSLSSRVFQIY
LDKQKRNYALDFDDLIHFTAFILDNNPDVLLKWQENLHYIQVDEAQDSSESQFHLVEMLS
RVHQNLFLVGDPDQTIYEWRGAKPEYLVEFDTIFPDTQTIIMNRNYRSTPNILKVGNHII
KNNTIRVDKDMITDKPEGFEVVHFHGKNDFEESRWIASEIKEILQSEDASYSDITILYRS
NHLSRNIEQALIKDNIPYTIFGGIRFFERKEIKDVLSMLRLIVQGDNFSFLRMHNQPTRG
LGKKFLERLSLLAGEQNLSLLQALEKNIADKELAKKGAVDFLALINELRETAKTKSISDL
VKIILDKSGLSDLYRKDGDEDRLENIKELVNSMLLLEKENNAPVNIVEYLQEIALYTDLD
ADTQQQDKVRLMTIHISKGLEFPYVFLCGFTEGILPSALSIKERRKRAIEEERRLMYVAV
TRAEKRFYMTDSEGFNFTTGLNKYPSRFLFEISEEFYVRKGKLSPEIIQNNETKSNVLQS
DTQTTFKEGDLVMHPVWNKGKVKTVDVEKTQYIVEFAAIAKEKPIDFSFKHLTSIEDANT
DETADFTPQDLQQHLKSTPNPFEKTESEPKKNVFEKTQDSSLNEDKDSGEEEKKWWKPWS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccgattctagataatcttaatcctaaccaactgcaggccgttaaaaccacg
gaaggctacgtacgcgttatcgctggagcaggatcaggaaaaacaaaggcgctgacttcc
cgatttgcctatattgtagacaggctggggattaattcttccaacatactttgcgtgact
tttaccaataaagccgctcaggaaatgaaaaaacgtgtcaaggctctcataggagataac
tatgatgtgagttttattactacctatcacggtttttgcgtaagattcctgcgcgaggaa
atcaacaaaatacattatccgaagaattttatcattttggatgccgaagatcagaaaagc
atactcagggatgttttcacggagcttcagatcaattcgaaacacttgacttttaaacaa
gttttacgctttatatctaagcagaaaagcacttcaaattaccttggttatatacttgaa
aacaaaagctttgagcctgatgagagtgattcgttatcaagccgtgttttccaaatatac
cttgacaagcaaaaacgaaattatgcattggattttgatgatctcatacatttcacggcg
ttcattttagacaacaatcctgatgtgcttttaaagtggcaggaaaacctgcactatatt
caagttgatgaggcacaggacagttctgaaagccagtttcatttagttgaaatgctctca
cgcgtacatcagaacctttttcttgttggggatccagatcagactatttatgaatggcgt
ggagccaaacctgaatatctagtggaatttgacactatctttcctgatacgcagaccatc
attatgaatcgcaattaccgctccactcctaatatcttgaaggttggtaatcatatcatc
aaaaataatactattagggttgataaggatatgatcaccgataagcccgaaggctttgaa
gtagtgcatttccacggaaaaaatgattttgaggagagccgctggatagcttctgaaata
aaagaaatattgcagtccgaagatgcttcatactctgatataactatattataccgttcc
aaccacctttccagaaatatagagcaagcacttataaaagacaatattccttataccatt
tttggaggaatccgtttctttgagagaaaagagataaaagacgtcctttcgatgttacgc
cttattgttcagggggataatttttcttttctgcgcatgcacaatcagcccacaaggggt
cttggcaagaaatttctagaaaggcttagtcttttagccggagagcaaaatctctctctg
ctccaggcattggaaaaaaacatagccgataaagaactcgctaaaaaaggtgccgtagat
tttctggcactaattaatgaacttcgtgaaactgctaaaaccaaatctatatcagacctg
gtaaaaatcatactggataagagcggactctctgatctttaccgaaaagatggtgatgag
gacaggcttgaaaatattaaagaacttgtaaattcaatgctgctcctagaaaaggaaaat
aatgctcctgtgaacattgttgagtatctgcaggaaattgccttgtatacagatttggat
gccgatacccagcagcaggataaggtaagacttatgaccattcatatttctaaaggtctt
gaatttccttatgtctttttatgcggctttactgaaggaatactgccgagcgctctatct
attaaagaaagaagaaaacgtgccattgaggaagaacgaagactcatgtatgtggcagtt
acacgcgctgagaaaagattttatatgactgattcggagggttttaatttcactacgggc
ctcaacaaatatccttcaaggtttctctttgaaatcagtgaggagttttatgtacgaaaa
ggaaaactttcgccagagattattcaaaacaatgaaacaaaatccaatgttttacaaagt
gatacccaaacaacatttaaggagggtgatctggttatgcatccggtctggaataagggg
aaagtaaaaactgtagatgttgaaaaaacccaatacattgtggaatttgctgcaatagca
aaagaaaaaccaatagatttcagttttaaacacttaacatctatcgaagatgccaatact
gatgaaactgctgattttactccccaagacctgcaacaacatttaaaatctactccaaat
ccctttgaaaaaacagaatctgagccgaagaaaaacgtatttgaaaaaacacaggattcc
agcttaaatgaggataaggatagcggcgaagaggaaaaaaaatggtggaaaccctggagt
tag
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integrated database retrieval system
