Flavobacterium sp. GSB-24: FLGSB24_38410
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Entry
FLGSB24_38410 CDS
T10693
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf00541
Biosynthesis of various nucleotide sugars
flf01100
Metabolic pathways
flf01250
Biosynthesis of nucleotide sugars
Module
flf_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FLGSB24_38410 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flf01005
]
FLGSB24_38410 (kdsB)
Enzymes [BR:
flf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
FLGSB24_38410 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
flf01005
]
Lipid A
FLGSB24_38410 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
IspD
NTP_transf_3
PFK
Motif
Other DBs
NCBI-ProteinID:
BDU27097
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Position
complement(4645759..4646493)
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AA seq
244 aa
AA seq
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MKIIAVIPARYASTRFPAKLMQDLGGKTVILRTYEAAVSTNLFDDVFVVTDSDLIFEEIV
SNGGKAIMSIKEHESGSDRIAEAIADLDVDIVVNVQGDEPFTEAEPLAQVLSVFENDTDK
KIDLASLMREITNEDEINNPNHVKVVVDQSQFALYFSRSVIPYPREKNVGVRYFQHIGIY
AFRKQALLDFYSLPMKSLEASEKLEQLRYLEFGKRIKMVETTHVGIGIDTAEDLERARAM
LRDI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatagcggtaattccagcccgatatgcttcaactcgttttcctgcaaaattg
atgcaggatttaggagggaaaactgtgattttaagaacttacgaagcggcagtttcaaca
aacttgtttgacgatgtttttgtagtaaccgattctgatttgatttttgaggaaatcgtt
tcaaatggcggaaaagcgattatgagcatcaaagaacacgaatctggaagcgaccgaatt
gcagaagctattgcagatcttgacgttgatattgtggtaaatgttcaaggcgacgaacct
tttacagaagcagaacctttggcacaagttttatctgtttttgaaaatgatacagataaa
aagattgatttagcttcactaatgcgcgaaataaccaatgaagatgaaattaataatcca
aaccatgtaaaagttgtcgtagaccaatcgcagtttgccttgtatttttcccgttcagtg
attccatatccgagagagaaaaatgttggagtgcgatattttcagcatatcggaatctat
gcttttagaaagcaagccttattagatttttatagccttcctatgaaatctttagaagct
tctgagaagttggagcagttaagatatttagaattcggaaaacgcattaaaatggtcgaa
acaactcatgtaggaattgggattgatactgctgaggatttggaaagagctcgagcaatg
ctgcgtgatatttag
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