Flavobacterium sp. GSB-24: FLGSB24_40290
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Entry
FLGSB24_40290 CDS
T10693
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
flf Flavobacterium sp. GSB-24
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flf03016
]
FLGSB24_40290 (truA)
Enzymes [BR:
flf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FLGSB24_40290 (truA)
Transfer RNA biogenesis [BR:
flf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FLGSB24_40290 (truA)
Prokaryotic type
FLGSB24_40290 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BDU27285
LinkDB
All DBs
Position
4871036..4871770
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AA seq
244 aa
AA seq
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MRYFIQFAYNGTHYHGWQIQPNASSVQETLNKALSVLLNESISIMGAGRTDTGVHATEMF
GHFDTEKTLDVPILIHKLNSYLPKDIAIFDIILVHDDAHCRFDATKRTYEYHINTIKNPF
LQELSWYVNQKLDVNLMNEAAQLLLKHTDFQCFSKVNTDVNTFDCTIFEAFWKQENSKLI
FTISANRFLRNMVRAIVGTLINIGLHKITLADFENIIASKSREKAGFSVPAHGLYLTKID
YDYL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgagatattttattcaatttgcttataacggaacacattatcatggctggcagatacag
cccaacgcttcttctgttcaggaaactttaaataaagctttatcggttttattgaatgaa
tctattagcattatgggcgctggaagaacagatactggtgtgcatgcaactgaaatgttt
gggcattttgatactgagaaaactttagatgttccaattttgattcataaactgaattct
tatttaccaaaagatattgccatttttgatattattctggttcatgatgatgcgcattgc
cgatttgatgctacaaaaagaacgtacgaatatcatatcaataccattaaaaatccattt
ttacaggaattaagctggtatgtaaatcagaaactggatgtgaatttgatgaacgaagcg
gcgcagttattattgaaacataccgattttcaatgtttttcaaaagtaaacacagatgta
aatacttttgactgcactatctttgaggcgttttggaaacaagaaaactcaaaactgatt
tttactatttcagcaaatcgatttttgagaaatatggttcgggcaattgtcggtacttta
attaatatcggtttacacaaaattacgctggcagattttgaaaatataattgccagcaaa
agcagggaaaaagctggattttcggttccagcacatggtttatatttaaccaaaatagat
tacgattatttatag
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