Flavobacterium sp. GSB-24: FLGSB24_40900
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Entry
FLGSB24_40900 CDS
T10693
Symbol
fadD
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
flf Flavobacterium sp. GSB-24
Pathway
flf00061
Fatty acid biosynthesis
flf00071
Fatty acid degradation
flf01100
Metabolic pathways
flf01212
Fatty acid metabolism
flf02024
Quorum sensing
flf04146
Peroxisome
Module
flf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
flf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FLGSB24_40900 (fadD)
00071 Fatty acid degradation
FLGSB24_40900 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FLGSB24_40900 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FLGSB24_40900 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
flf01004
]
FLGSB24_40900 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flf04147
]
FLGSB24_40900 (fadD)
Enzymes [BR:
flf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FLGSB24_40900 (fadD)
Lipid biosynthesis proteins [BR:
flf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FLGSB24_40900 (fadD)
Exosome [BR:
flf04147
]
Exosomal proteins
Exosomal proteins of breast milk
FLGSB24_40900 (fadD)
Exosomal proteins of breast cancer cells
FLGSB24_40900 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BDU27346
LinkDB
All DBs
Position
4933540..4935318
Genome browser
AA seq
592 aa
AA seq
DB search
MVSITRLFDFPYYQQETYNLPVALATKKNGVWEKTSSQEYIAKANAVSRALLRMGVKKDD
KIALITSNNRTEWNIMDIGILQTGAQNVPIYPTIAEEDYEYILNHSGSIYCFVSDDEVYQ
KVQAIRANVPTLKEVYSFNEIPGCKHWSDLLLAGEDESNQNEVEAIKDSIKTDDLATIIY
TSGTTGKPKGVMLSHKNIVSNVLDSAPRIPFDAGKSTALSFLPICHIFERMILYIYQYYG
VSVYFGESIDKISDNLKEVRPTVITAVPRLLEKVYDKIYAKGAELTGIKKKLFFWAIDLG
LKYEPYGANGFWYEFQLKIARKLIFSKWKEGLGGNLDLMVSGSAALQPRLTRVFAAAEIP
VMEGYGLSETSPVIAVNDQRNKGFKIGTVGKPIRNIEVKIAEDGEILCKGPNVMLGYFKD
PEKTAEALQDGYFHTGDIGEIDSEGFLKITDRKKEMFKTSGGKYIAPQMIENAMKQSRFI
EQIMVVGEGEKMPAAFIQPNFEFVKEWAKIHKITLGSTDKEISENPEVIKRIDSEVEEIN
KKFGHWEQIKRFELTPDVWSIDGGQLTPTLKLKRKIIKEIYKDLYAKIYGQN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatcacacgcctttttgattttccctattatcaacaagaaacttacaacctc
ccagttgctcttgcaaccaaaaaaaatggagtctgggaaaaaacatctagccaggaatat
attgcaaaagcaaatgctgtttcaagagcattattgcgcatgggcgttaagaaagatgat
aaaattgccttaattacttcaaataacagaaccgagtggaatatcatggatattggtatt
ttgcagactggtgctcagaatgttcctatttatccaactattgctgaggaagattacgaa
tatattttaaaccacagcggcagtatttactgctttgtttctgatgatgaagtatatcaa
aaagtacaggctattagagcgaatgtaccaactttaaaagaggtttattcttttaatgaa
attccaggctgcaaacattggtctgatttattattagcaggagaagacgaaagcaaccaa
aatgaagttgaagctataaaagacagtataaaaacagatgatttagcgactattatttat
acttctggaacgacaggaaaaccaaaaggtgttatgctttcgcacaaaaatattgtttca
aatgttttagacagtgcgccaagaattccttttgatgccggaaaaagtactgctttaagc
ttcttaccaatctgtcatatttttgaaagaatgattttgtacatctatcaatattatggt
gtttcggtatattttggcgaatctattgataaaattagtgataacttaaaagaagttcgt
ccaacagttattacagctgttccaagacttttggagaaagtttacgataaaatttatgct
aaaggtgctgaattaactggcattaagaaaaaactatttttctgggctattgatttaggt
ttaaaatatgagccatacggagcaaacggattttggtatgaattccaattaaaaattgcc
cgcaaacttattttcagtaaatggaaagaaggtttgggcggaaacctggatttaatggtt
tctggaagtgcggctttgcagcctcgtttaacaagagtttttgctgcagcagaaattccg
gttatggaaggttacggtttatctgaaacatctccggtaatcgctgtaaacgatcaaaga
aacaaaggttttaaaattggcacggttggaaaaccaatccgcaatatagaagttaaaatt
gccgaagacggagaaattctttgcaaaggaccaaacgtaatgttaggctatttcaaagat
cccgaaaaaacagctgaagctttacaagacggttatttccacacaggagatatcggcgaa
attgacagcgaaggtttcttaaaaattaccgatcgtaagaaagaaatgttcaaaacttct
ggaggtaaatatattgcaccgcaaatgatcgaaaatgccatgaaacaatctcgttttatt
gagcagattatggttgttggtgaaggcgaaaaaatgcctgctgcttttattcagccaaac
tttgaatttgtaaaagaatgggctaaaattcataaaattactttaggaagcacagataaa
gaaatcagcgaaaatccagaagtaattaaacgtattgatagtgaagtggaagaaatcaat
aaaaaattcggacactgggaacaaatcaaacgttttgaacttacgccagatgtttggtct
atcgacggaggacaattgactcctacgctgaaattaaaacgtaaaatcattaaagagatt
tataaagatctgtatgctaaaatttatggtcagaattaa
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