KEGG   Flagellimonas sp. HMM57: LV716_01890
Entry
LV716_01890       CDS       T07897                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
flg  Flagellimonas sp. HMM57
Pathway
flg03030  DNA replication
flg03430  Mismatch repair
flg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:flg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LV716_01890
   03430 Mismatch repair
    LV716_01890
   03440 Homologous recombination
    LV716_01890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:flg03032]
    LV716_01890
   03400 DNA repair and recombination proteins [BR:flg03400]
    LV716_01890
Enzymes [BR:flg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LV716_01890
DNA replication proteins [BR:flg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LV716_01890
DNA repair and recombination proteins [BR:flg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LV716_01890
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 T4_Spackle
Other DBs
NCBI-ProteinID: UII76565
LinkDB
Position
complement(419466..420242)
AA seq 258 aa
MELQLTKPICFFDLETTGTNVAKDRIVEISILKVFPNGNKESRTWLVNPEMPIPPEVILV
HGISDERVANEPTFKQLSKEIYKMIKDSDLAGFNSDRFDIPLLAEEMLRADVDFDMKNTV
SVDVQTIFHKMEKRTLGAAYKFYCDKNLDDAHSAEADTLATYEVLLAQLDRYPELENNMK
KLSEFTTRKQSLDFAGFIGVNKKNEPIFSFGKHKDKTVDEVMEKEPGYFGWILNADFPLY
TKKVLTQIKLSKLNNKLS
NT seq 777 nt   +upstreamnt  +downstreamnt
atggaactacaacttaccaaacccatctgtttttttgatttggaaactactgggaccaac
gtagccaaggatagaattgttgaaatctctattctcaaggtttttccgaatggaaataaa
gaaagcaggacatggctcgttaatccagaaatgcccattcccccagaagtgattttggta
catggtatttccgatgaaagagttgccaatgaacctacgttcaagcaactgtccaaagaa
atctataagatgattaaggatagtgatttggcgggtttcaattcagacaggttcgatatt
cccttattggcagaggagatgctaagggcagatgtagattttgatatgaagaataccgtc
tccgtagatgtgcagactattttccacaaaatggaaaaacgaacattgggagccgcatac
aaattctattgtgataaaaacttggacgatgcacacagtgcagaagcagataccttagcc
acttacgaagtactgctggcacaactggacaggtatccagaactagagaacaacatgaaa
aagctttctgagttcactactcgtaaacaatccttggattttgcaggatttataggtgtg
aacaagaaaaacgaacccatcttttctttcggaaaacataaggacaaaaccgtagatgag
gtcatggaaaaagaacctggctattttggttggattttaaatgctgattttccactgtat
accaaaaaggtcctcacacaaataaagctgagcaagcttaataataagttatcttaa

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