Flagellimonas sp. HMM57: LV716_02925
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Entry
LV716_02925 CDS
T07897
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
flg
Flagellimonas sp. HMM57
Pathway
flg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LV716_02925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flg03019
]
LV716_02925
03016 Transfer RNA biogenesis [BR:
flg03016
]
LV716_02925
Enzymes [BR:
flg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LV716_02925
Messenger RNA biogenesis [BR:
flg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LV716_02925
Transfer RNA biogenesis [BR:
flg03016
]
Prokaryotic type
tRNA degradation factors
LV716_02925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
Vip3A_N
KH_2
Motif
Other DBs
NCBI-ProteinID:
UII76760
LinkDB
All DBs
Position
650429..652651
Genome browser
AA seq
740 aa
AA seq
DB search
MIPKTFKEVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQADVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFVINPTRAQLKESDIDMMI
GASADSVMMVEGEMDEISEEEMTEAIKFAHEAIKVQCAAQIRLAEAFGKKDVREYDPERE
DEDLAKKVHDLTYDKVYAVAKAGSAKHERSAAFDAIKEEIKATFSEEELEDFGDLVSKYF
YKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEIDYLPSVHGSSIFTRGETQALATVTLG
TSREANQIDMPSYEGEETFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMIPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLITDTDSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVKALMQAKDGRLHILEKL
TDTIETPREDVKSYAPKIVTKVIPGEYIGAVIGSGGKVIQELQKETNTTIVINEDPDTEE
GIVEILGTGQEGIDAVIAKIEALMFKPEVGSVYEVKVIKMLDFGAVVEYIEAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGLDPRTKKEKVSRKALLPKPEGYVERPPRRDKG
DRRNSGDRRNGNRDRKPRRD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaaacttttaaagaggtcatagaccttggtgacggtagagagatttctatt
gaaaccggaaaattggcaaaacaggcccatggctctgttgtcgttcaatctggcaagtgt
atgttattatgtacagttgtgtccaactacaaacaagcagatgtggattttttaccgtta
acggtagattaccgcgaaaaatttgctgccgctgggcgttaccctggtggttttttcaag
cgtgaagcaagaccaagtgacggtgaagtattgaccatgcgtttggtagaccgtgttctt
cgtccgcttttccctaaggattatcattccgaaacacaggtgatgattcagttaatgtct
catgatgaagacgtaatgccagatgctatggcgggtttagccgcttctgcagctattcaa
ctttcagattttccatttgaatgcgcaatttctgaagctagagttggtcgtgtaaatggc
gaatttgtcatcaatccaaccagagcacagctaaaagaatccgacattgacatgatgata
ggtgcttctgcagattctgtgatgatggttgaaggagagatggatgaaatctcagaagaa
gaaatgacagaggccatcaaatttgcgcacgaagccattaaagtacaatgtgctgcccaa
atacgattggccgaggcttttgggaagaaagatgttagggaatatgatccagagcgtgaa
gatgaagatcttgccaaaaaggtacatgaccttacgtatgataaagtttatgcagttgca
aaagcaggttctgccaaacatgagcgtagtgctgcttttgatgctattaaagaagaaata
aaagcgactttttctgaagaggagttagaagattttggagatttagtatccaaatacttc
tacaaagcggaaaaagctgccgttagggatttaaccctcaacgaaggacttcgattagat
ggtagaaaaacggatgagattcgaccaatttggtgcgagatcgattatttaccttcggtt
cacggttcttccatctttacaagaggagaaactcaggcattggctacggttactttaggt
acatcaagagaggccaatcaaatagatatgccatcttatgagggcgaagaaactttctat
ctgcactataacttccctcctttttcaactggtgaagctagaccaattcgtggtacatcg
cgtagagaagtaggtcacggaaacttggcgcaacgtgccttaaaagggatgattcctgaa
gattgtccatatactgtaagagttgtttccgaagtattggaatccaatggttcttcttct
atggcaacagtttgctctggtactatggctttgatggatgccggtgttcaattaaaaaaa
ccagtttctggtatagccatgggattgattactgataccgattctggaaagtatgccgtt
ttatccgatattttgggcgatgaagatcacttaggagacatggattttaaagtgacaggt
actgctgatggtattactgcttgtcaaatggacatcaaggtaaaaggactttcctatgaa
attttggtcaaagccttaatgcaagccaaagatggtagattgcatattctagaaaagttg
acagatactattgaaacaccaagagaagatgttaagtcttatgccccaaaaattgtcact
aaagttattccaggagaatatattggtgccgtaattggttctggtggaaaagtgattcaa
gaattgcaaaaagaaactaacactactattgtcatcaacgaagatcctgacactgaagaa
ggtatcgtggaaattctgggtactggacaagaaggcattgatgcggttatcgcaaagata
gaggcattaatgttcaaacccgaagtaggtagtgtttatgaggtgaaagtcattaaaatg
ctagactttggtgccgttgtagaatacattgaggcccctggcaacgaagtattactgcat
gtatctgaactagcttgggagcgcactgagaatgtttctgatgtagtgaacatgggagat
gtctttgacgtgaagtattttggtcttgacccaagaaccaaaaaagaaaaagtttcccgc
aaagcccttttgccaaaaccggaaggttatgttgaaagacctccaagacgagacaaaggc
gatcgtagaaatagtggtgaccgcagaaatggcaatcgtgatcgaaagccaagaagggac
taa
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