Flagellimonas sp. HMM57: LV716_04335
Help
Entry
LV716_04335 CDS
T07897
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
flg
Flagellimonas sp. HMM57
Pathway
flg02020
Two-component system
flg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
flg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LV716_04335 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LV716_04335 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flg03021
]
LV716_04335 (rpoN)
Transcription machinery [BR:
flg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LV716_04335 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
RelE
DUF3874
MarR
Motif
Other DBs
NCBI-ProteinID:
UII77024
LinkDB
All DBs
Position
985805..987262
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGKAENETIDDGY
EDTYDDSADNETIAAEEINIDDYLSDDEIPDYRTQTSNYSPDDDEKSIPYASGTSFNQYL
LNQLNTIYLNDEEWAIAEFLVGSVDESGYIRRPLTDIMDDLAFTQNIYTEEEQIEAVLKI
VQNLDPAGVAARSLEECLIIQLKRKSKSPAIELAISILERSFEQFTKKHYSKLMQKHHIT
EEELKDAISEIEKLNPKPGGSYAGNTRIIEHIVPDFSIKIVEGELELTLNGRNAPELHVS
RDYNNMLEGYKNSKEKSKSQKDTVLFIKQKLDAAKWFIDAIKQRQQTLYVTMSTIMNYQR
EYFLTGDERKLRPMILKDIADQIHMDVSTVSRVANSKYVDTPYGTKLIKEYFSESMKNEQ
GEDVSTKEIKKILETVIGEEEKKKPLTDDRLAKILKERGYPIARRTVAKYREQLGIPVAR
LRKQI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaacatctacagtttaagctttcccagaaactgtctccccaacagattcag
ctcatgaaattgatccaattgcccacacaggcttttgaacaacgtttgaagcaggaactg
gaggaaaatcccgctcttgaaagtggtaaagctgaaaacgaaactatagatgacgggtat
gaggacacctatgatgatagtgcggacaatgaaaccattgctgctgaagaaatcaatatt
gatgattatttaagcgatgacgaaattccggattataggacacagacaagtaattatagt
ccagatgatgacgaaaaaagtattccctatgcgtccggcacttcgtttaaccaatatttg
ctaaatcaactcaacaccatctatcttaatgatgaggaatgggcaattgctgaatttttg
gttggcagtgttgatgagagcggatatatacgaagaccgttaacggatatcatggatgat
ttggcttttacccaaaacatttatacggaagaagaacagattgaagctgttttaaaaata
gtacagaatcttgatcctgccggtgttgcagcaagatccttggaagaatgtcttattatt
caactaaaacgaaaaagcaaaagccccgccattgaactggcgatttcgattctagaaagg
tcctttgaacagtttaccaaaaaacattattccaagctgatgcaaaagcatcatattacg
gaagaagagctcaaggatgcaatttcagaaattgaaaaattaaacccaaaacctggtggc
tcttacgcgggaaacaccagaataatagaacatattgttccagatttttccattaaaata
gtagaaggtgaattggaattgaccttaaatgggcgtaatgctcccgaacttcacgtatct
agggactataacaatatgctagagggctataaaaattccaaggaaaaatccaagtcccaa
aaagataccgtgctcttcataaaacaaaaattagatgcggccaagtggtttatagatgcc
attaaacaaagacagcagacgctctatgtgaccatgagcactattatgaactaccagcgt
gaatatttcttaactggagacgagcgaaagctacgccctatgatattaaaagacatagct
gaccagattcatatggatgtatccactgtttctagagttgcgaacagcaagtatgtcgac
accccctatggaacgaaactcatcaaagaatacttttccgagtccatgaaaaatgaacaa
ggagaagacgtatccacaaaggaaataaagaagatactggaaactgttattggagaagaa
gaaaagaaaaagcctttaacagacgataggttagcgaagattcttaaggaacgggggtat
cctattgcacgaagaactgttgctaaatatagagagcagttgggaatacccgtagccagg
ttaagaaagcaaatctaa
DBGET
integrated database retrieval system
