Flagellimonas sp. HMM57: LV716_10605
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Entry
LV716_10605 CDS
T07897
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
flg
Flagellimonas sp. HMM57
Pathway
flg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LV716_10605 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flg03019
]
LV716_10605 (groL)
03110 Chaperones and folding catalysts [BR:
flg03110
]
LV716_10605 (groL)
03029 Mitochondrial biogenesis [BR:
flg03029
]
LV716_10605 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flg04147
]
LV716_10605 (groL)
Enzymes [BR:
flg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LV716_10605 (groL)
Messenger RNA biogenesis [BR:
flg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LV716_10605 (groL)
Chaperones and folding catalysts [BR:
flg03110
]
Heat shock proteins
HSP60 / Chaperonin
LV716_10605 (groL)
Mitochondrial biogenesis [BR:
flg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LV716_10605 (groL)
Exosome [BR:
flg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LV716_10605 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LV716_10605 (groL)
Exosomal proteins of breast cancer cells
LV716_10605 (groL)
Exosomal proteins of colorectal cancer cells
LV716_10605 (groL)
Exosomal proteins of bladder cancer cells
LV716_10605 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
UII74716
LinkDB
All DBs
Position
complement(2393023..2394657)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIQFDVEARDGLKKGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVTVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVENLAKQSKKVGDSSEKIKQVAAISANNDETIGDLIAQAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMIADLDNPYILLFDKKISAMKDLLPVLEPV
AQSGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTNGTV
ISEERGFSLETATIDMLGTTERVTIDKDNTTIVNGGGVAKNIKTRVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLSKVSAVNADEETGLQIVARAIESPLRTIVENAGGEGSVVVAKVLEGKSDFGYDA
KSDAYVEMMKAGIIDPKKVTRVALENAASVSGMILTTECSLTDIKEDAPAMPPMGGGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattcaatttgatgtagaagcacgtgatggccttaaaaaaggcgttgac
gccctggcaaatgcagtaaaagttactctaggacctaagggaagaaatgttatcattagc
aaatcgttcggagctccacaggttaccaaagatggtgtaactgtagcaaaagaaatagaa
ttggaagatgcgcttgagaatatgggtgcacaaatggtaaaggaagtagcttcaaaaacc
aacgatttagctggtgatggtacaactaccgcaacagtgctagcacaggccatcgtaaag
gaaggccttaagaatgtggctgcaggtgccaatccaatggacctaaaaagaggtattgac
aaagcggtggaagccattgttgagaacttggcaaagcaatccaaaaaagttggagactct
tcagaaaagataaaacaagtggctgcaatttctgctaacaatgatgagactatcggtgat
ttaattgcacaagcattcggaaaagttggtaaagaaggggtaattaccgttgaagaggca
aaaggaacagatacatacgttgatgttgttgagggaatgcagtttgacagagggtatctt
tctccctacttcgtgacagattccgagaaaatgattgcagatttagacaacccttatatt
cttttgtttgacaagaagatttctgcgatgaaggatttacttccagtattggagcctgta
gctcagtctggaaagccattattgatcattgctgaagatgttgatggtgaagcattggca
actttggttgtgaacaaactaagaggttccttaaaaattgctgcagttaaagctcctggt
tttggtgacagaagaaaagcaatgctggaggacatcgctatcttgacaaatggtaccgtt
atttcagaagaaagaggattctctttggaaacggcaacaatagatatgttgggtactacg
gaaagagtaacaatcgacaaggacaacactaccatcgttaatggcggaggtgttgcaaaa
aatatcaagacccgtgtcaaccaaataaaagcgcagattgaaactactacttctgattat
gacaaagagaagttacaagagcgtttggccaaactagctggtggtgttgccgtactctat
gtaggtgctgcctctgaagttgaaatgaaagagaagaaagaccgtgtggacgatgctttg
catgctaccagagctgctgttgaagaaggtattgttgctggtggtggtgttgctttggtt
agagctaaatccgtactttctaaagttagcgctgtaaatgcagatgaagaaacaggattg
caaatcgttgcaagggcaattgaatctcctttgagaaccattgttgaaaatgctggtggt
gaaggatcggtagtcgttgcaaaagttttggagggcaaaagtgactttggttacgatgca
aaatccgatgcttatgtagaaatgatgaaagcaggtattatagatcctaaaaaagtgacc
cgtgttgctttggaaaatgccgcttcggtttctggaatgatcttgaccacggaatgttct
ttaacggacattaaagaagatgctcctgctatgcctccaatgggtggcggtggcggaatg
ccaggcatgatgtaa
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