Flagellimonas sp. HMM57: LV716_11930
Help
Entry
LV716_11930 CDS
T07897
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
flg
Flagellimonas sp. HMM57
Pathway
flg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
flg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LV716_11930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flg03021
]
LV716_11930
03400 DNA repair and recombination proteins [BR:
flg03400
]
LV716_11930
Enzymes [BR:
flg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LV716_11930
Transcription machinery [BR:
flg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LV716_11930
DNA repair and recombination proteins [BR:
flg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LV716_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UII74966
LinkDB
All DBs
Position
2706126..2707118
Genome browser
AA seq
330 aa
AA seq
DB search
MALLNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRID
GVEHEFSVIPGVVEDVTEMILNLKQVRFKRQIDDVESETVSVSVSGKEQLTAGDFQKFIS
GYQVLNPDLVICNMNSKVSINLEVIIEKGRGYVPAEENKKSNAPIGSIAVDSVYTPVKNV
KYSIENFRVEQKTDYEKLVFEIVTDGSIHPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLQFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattacttaattttcagaagcccgataaagttataatgatagattctacagatttc
gaagggaaatttgaatttcgccctttggaacctggttatggattaacagttggaaatgca
cttagaagagttttactttcctctttggagggttttgcgattacttctgtgcgtatcgat
ggagttgaacatgaattctctgtcattcctggcgtagtagaagacgttacagaaatgatt
ttgaaccttaaacaagttcgtttcaaaagacagatagatgatgttgagagtgaaacagtt
tctgtttcagtaagtggaaaagaacaattgaccgctggagatttccaaaaattcatctct
ggttatcaagtactcaatccagatttggttatttgtaacatgaactccaaagtaagtatt
aacctagaggttattattgaaaaaggaagaggttacgtgcctgccgaagagaataaaaaa
tccaatgcacctatagggagtattgctgtagattctgtttacactccggttaagaacgta
aaatatagtatagaaaactttagggttgaacaaaagaccgattatgagaaattggttttc
gaaatcgtaactgacggttctattcaccctaaagatgcattgaccgaagctgctaaggtt
ttgattcaccactttatgttgttctctgatgagcgcattacattggaagccgatgaaatc
gcacaaacagaaacatacgatgaggaatcattgcacatgcgccaattgttgaagaccaaa
ttggtagacatggatttgtccgttagggcgttgaattgtcttaaagctgccgaggtggat
actttgggagatttggtatccttcaataagaacgacttaatgaagtttagaaactttggt
aaaaaatcattgaccgaattggaagagttggtcatcaacaaaggccttcaatttggaatg
gacttatccaaatataaattggacaaagattaa
DBGET
integrated database retrieval system
