Flaviflexus ciconiae: EJ997_00650
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Entry
EJ997_00650 CDS
T05772
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
flh
Flaviflexus ciconiae
Pathway
flh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
flh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJ997_00650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flh03021
]
EJ997_00650
03400 DNA repair and recombination proteins [BR:
flh03400
]
EJ997_00650
Enzymes [BR:
flh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJ997_00650
Transcription machinery [BR:
flh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJ997_00650
DNA repair and recombination proteins [BR:
flh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJ997_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AZQ76051
UniProt:
A0A3S9PUK3
LinkDB
All DBs
Position
150442..154332
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNLFDQLHISLATSQDVHSWSHGEVKKPETINYRTLKAEKDGLFCERIFGPTRDWEC
ACGKYKRPRYKGIECERCGVEVTRAKVRRERMGHIQLAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMVTDVDEEGRSEAMPELRGELDLELKEIENQMHVDINERAEEMERE
LEAAEAENASAKEKKAIKDAGEKDQGNIRKSAEAERDHVEEVWDRFMKLKVGDLEGDEDL
YREMYARWGMYFEASRGAEAIQERLRTFDLEAEAEILQEVIKTGTAQRKTRALKRLKVVN
AFRTTGTKPESMVLDVLPVLPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
DAPEIMVNNEKRMLQESVDALFDNGRRGRPVQGAGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKAMALELFKPFVQKRLVDQQVAKNIKAAKRLIERQR
TEVWDILEEVITDHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILKPSDGRPVTMPSQDMIIGLYHLTSENDHEGEKRS
FSAVGEAVMAHDNGDIALGEPIRIRFSELVPPRGWVAPEGWEEGQPIMLETTLGRALFND
ALPVKFPYVNEVVDKKRLGSIINELAERYPKVDVGASLDALKSTGFYWAGRSGVSISLAD
IEVPESKAGILEAAEAQAAKIEELFEDGMIQDADRRRDLFDLWTEVTDRVAKEMRDNFSG
NNSVNRMVTSGARGNWTQVRQLAGMRGLVANPKGEIISRPIKSNYFEGLSVLEYFSATHG
ARKGTADTALRTADSGYLTRRLVDVAQDVIIRENDCGTNKGLTNRIAFVDEDGSRRLDPA
VETSVYARTLAQDVADADGNVIVSAGTDLGDVEIERLFNLGIDEVTVRSVLTCNSRSGAC
ALCYGRSLATGLLVDIGEAIGIVSAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQE
LFEARTPKGEAPITEAAGTVSIEDSERSRQIVIKRDDGGEDLAYQVSRSAKLLVEDGSHV
AVGEQLTEGSVDPKKVLRISNRRRAQLYLVEQVQAVYRSQGVEIHDKHIEVIVRQMLRRV
TVIESGDTNLLPGELADVKDYESASREAVARGGKPATARPELMGITKASLATDSWLSAAS
FQETTKVLTEAALNSKRDPLNGLKENVILGKLIPAGTGLEKLRQVKAEPTTEARLEFEKM
TGFIRQDLDPYDSGLDLGAGLYGTGYSGYGPAFGGN
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgttaatctcttcgatcagctccatatctcgcttgcgacctcacaggacgtt
cactcctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
gccgagaaggatggtctgttctgcgaacgcatcttcggtccgaccagggactgggagtgc
gcgtgcggtaagtacaagcgtccccgctacaaggggattgaatgtgagcgctgcggtgtt
gaagtcacccgcgccaaggtgcgtcgcgagcggatgggtcacatccagctcgccgccccc
gttacccacatctggtacttcaagggtgtcccgtcacgcctgggatacctcctcgacatt
gccccgaaggacctcgaaaaggtcatctacttcgccgcctacatggtgacggacgttgat
gaagagggccgttcggaggccatgccggaactccgcggtgaactcgacctggaactcaag
gaaattgagaaccagatgcatgtagacatcaacgaacgcgccgaagaaatggagcgcgaa
ctcgaagccgccgaagccgagaacgcttccgctaaggaaaagaaggcgatcaaggacgcc
ggcgaaaaggaccaggggaacatccgcaagtccgccgaagccgagcgcgatcacgttgaa
gaggtctgggaccgcttcatgaagctcaaggtcggcgaccttgagggtgatgaggacctg
taccgcgaaatgtacgcccgctggggcatgtacttcgaggcatcgcgcggcgccgaggca
atccaggagcgcctgcgcaccttcgaccttgaagccgaagctgaaatcctccaggaggtc
atcaagaccggcaccgctcagcgcaaaacccgtgcgctcaagcgccttaaggttgtgaac
gcgttccgcacgacaggcacgaagcccgagtcgatggttcttgacgtcctcccggtgctt
cccccggacctgcgccccatggtgcagctcgacggtgggcgcttcgcgacctcggatctt
aacgacctctaccgtcgtgtcatcaaccgcaacaaccgactcaagcgcatgcttgacctc
gatgctcccgagatcatggtgaacaacgagaagcgcatgcttcaggagtcggtggatgcc
ctcttcgacaacggccgtcgcggccgtcccgttcagggcgccggtaaccgtcccctcaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctgctcggtaag
cgcgttgactactcgggccgttccgttatcgttgtgggcccgaccctcaagctgcaccag
tgcggccttccgaaggccatggctctcgagctcttcaagcccttcgtgcagaagcgtctc
gtcgaccagcaggttgcgaagaacattaaggctgcgaagcgtctcattgagcgccagcgc
accgaggtgtgggacatcctcgaagaggtcatcacggatcacccggtcctgctgaaccgt
gcaccaaccctgcaccgtctcggcatccaggcatttgagccgcagctcgttgagggtaag
gccattcagctgcacccgctcgtctgtgcggccttcaacgccgacttcgacggtgaccag
atggcagtgcacctgccgctgtccgccgaggcgcaggcagaagcccgtatcctcatgctg
tcggccaacaacatcctcaagccgtccgacggtcgtccggtcaccatgccctcgcaggac
atgattatcggcctgtaccacctgacgagcgagaacgatcacgagggcgagaagcgttcc
ttctccgcagtcggcgaggccgtcatggcccacgacaacggcgatattgcccttggcgag
ccgatccgcatccgcttctccgagctggtcccgccgcgcggctgggttgccccggagggc
tgggaagagggtcagccgatcatgctggagaccacgcttggccgtgcgctcttcaacgac
gctctccccgtcaagttcccgtacgtgaacgaggttgtcgacaagaagcgcctcggctcg
atcatcaacgagcttgccgagcgctacccgaaggttgatgtcggtgcgtcgctcgatgct
ctgaagtcgaccggtttctactgggccggacgttccggtgtctcgatctcgcttgccgac
attgaggttcccgagtcgaaggccggaatcctcgaggctgccgaagcgcaggccgcgaag
attgaggaactgttcgaggacggcatgattcaggacgccgaccgtcgccgcgacctgttc
gacctctggaccgaagtcaccgaccgcgtggcgaaggaaatgagggacaacttctcgggc
aacaactcggtgaaccgcatggtgacctccggtgctcgtggtaactggacgcaggtccgt
cagcttgcaggtatgcgcggcctcgtggctaacccgaagggcgagatcatctcccgcccg
atcaagtcgaactacttcgaaggcctctcggttctcgaatacttctcggcaacgcacggt
gcccgtaagggaacggccgatacggctctccgtaccgccgactccggttacctgacgcgt
cgacttgttgacgttgcccaggacgtcatcattcgtgaaaacgactgtggcaccaacaag
ggcctgacgaacaggattgccttcgttgacgaggacggctcccgccgcctcgatccggcg
gtcgagacctcggtctacgcccgtacgctcgcccaggacgtcgccgacgccgatggcaat
gtcatcgtgagcgccggcaccgaccttggcgacgtggagatcgagaggctgttcaacctc
ggcatcgacgaggttacggttcgctcggttcttacctgtaactcgcgttccggtgcctgt
gcactatgctacggacgttcgcttgcaaccggcctgctggtcgacatcggtgaggcaatc
ggtattgtctccgcacagtcgattggtgagccaggcacgcagctgacgatgcgtacgttc
cacaccggtggcgttgcttcggcagacgacatcacgcagggtcttccgcgtgtccaggag
ctcttcgaggcccgtacccccaagggtgaggccccgatcacggaggccgcaggcaccgtg
tccatcgaggactccgagcgctcccgccagatcgttattaagcgtgacgacggcggtgag
gacctggcgtaccaggtctcgcgttccgcgaagcttctcgtcgaggacggcagtcatgtc
gctgttggcgagcagctgaccgagggctcggttgacccgaagaaggtcctccgcatctcg
aaccgtcgtcgtgcacagctctacctggtcgaacaggtgcaggccgtgtaccgctcgcag
ggcgtcgagatccatgacaagcacatcgaggttattgttcgccagatgctgcgtcgcgtc
acggtcatcgagtccggcgacacgaacctccttcccggtgagctcgctgacgtcaaagac
tacgagtccgcaagccgcgaggcagtggcacgtggcggcaagcccgcaacggcccgcccg
gagctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctgtccgctgcttcg
ttccaggagaccaccaaggtcctcaccgaggccgcgctcaactcgaagcgcgacccgctg
aacggcctcaaggagaacgtcattctcggtaagctcatcccggccggcaccggtctggag
aagctccgccaggtcaaggcagagccgacgaccgaggctcgcctcgagttcgagaagatg
accggattcatccgccaggatcttgacccgtacgattcgggactggatctcggcgctggc
ctctacggaaccggatactccggctacggaccggccttcggtggaaactaa
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