Flaviflexus ciconiae: EJ997_06400
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Entry
EJ997_06400 CDS
T05772
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
flh
Flaviflexus ciconiae
Pathway
flh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
flh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EJ997_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flh03019
]
EJ997_06400
03009 Ribosome biogenesis [BR:
flh03009
]
EJ997_06400
Messenger RNA biogenesis [BR:
flh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJ997_06400
Ribosome biogenesis [BR:
flh03009
]
Eukaryotic type
Pre-60S particles
RNases
EJ997_06400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AZQ78175
UniProt:
A0A3S9Q0M0
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All DBs
Position
1444873..1445502
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AA seq
209 aa
AA seq
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MTGLDLANDGIVEVSVVITGSDLVPVDEGIDLVIKPTPEALASMGAFVTKMHTDSGLIKE
WETGLDLKDAEEQVLAYISARVPKGKAPLGGNSVGTDKSFLERDMPSVIDYLHYRVIDVS
TIKELARRWYPRAYFAAPEKFGNHRALGDIYDSIDELRYYRSVLFPQGDGPTTDQAKERS
AEILASRTQLSFDTAGSDETTTAEGTEQA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaccggactagaccttgccaatgacggcattgttgaagtttccgttgtcatcaccggt
tcagatcttgtccccgtcgacgaaggcatcgacctcgtcattaagcccacccccgaggcc
ctcgcttcgatgggtgccttcgtgacgaagatgcacaccgattcgggcctcatcaaggaa
tgggagaccggccttgacctgaaggacgccgaggagcaggttctcgcctacatctctgcc
cgtgtccccaagggtaaagcgcccctcggcggtaactccgtcggaaccgataagtcgttc
ctcgaacgcgacatgccttcggtcatcgactacctgcactaccgcgtcatcgatgtgtcc
accatcaaggagctggcgcgccggtggtatccacgcgcctacttcgcagctcccgagaaa
ttcggcaaccaccgtgcgctcggcgacatctacgactcaatcgacgaactgcgctattac
cgttccgttctcttcccgcaaggcgacgggcccacgacggaccaggcgaaggaaaggtcc
gcggagattctcgcatcccgcacccagctatccttcgataccgccggttcagacgaaacc
acaacggcagaaggaacggagcaggcataa
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