Bernardetia litoralis: Fleli_1300
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Entry
Fleli_1300 CDS
T02149
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
fli
Bernardetia litoralis
Pathway
fli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fleli_1300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fli03400
]
Fleli_1300
DNA repair and recombination proteins [BR:
fli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fleli_1300
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Fleli_1300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_inter
UvrA_DNA-bind
AAA_16
AAA_21
AAA_29
nSTAND1
nSTAND3
AAA_23
AAA_18
Viral_helicase1
RsgA_GTPase
AAA_33
DnaJ_CXXCXGXG
AAA_22
ATPase
AAA_25
NACHT
cobW
FtsK_SpoIIIE
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
AFM03733
UniProt:
I4AIE8
LinkDB
All DBs
Position
complement(1511734..1514805)
Genome browser
AA seq
1023 aa
AA seq
DB search
MSTTTEKALAKEEIAAEEKRIKELEDIDTKHNIVIKGARVNNLKNISLAVPRNKLVVITG
VSGSGKSSLAFDTLFAEGQRMYVESLSSYARQFLGRMEKPDVDWIRGVSPAIAVEQKVNT
RNPRSTVGTTTEIYDYLKLLFSRIGITYSPISGETVKKDNVSDVVDFIENYGDDETESNA
KYMILAPLVIPEERTFEDQLNILLQQGFTRIKAGEEVIFIEQLLPKEIDPELQKGKDQTK
QNLETFLDEHKGENQKDYLEEKKKLKKAGKTTKKTTKAKSTLSKLTKEQQTELKRLKKFP
LYILIDRGVIRKGDEQNRFRIADSVQTSFYESKGDCVVEIYQKGKEVETTSFSDRFEADG
MLFEEPNINFFSFNSPYGACRTCEGFGTVLGIDDDLVIPDKTMSVYEGVIAPWRTPKMSK
WLNPLIQKGIDFDFPIHRAYQDLTEEQQKLLWTGNKYFQGLDAFFEDLEKESFKIQYRVL
LSKYRGRKVCPDCLGTRIRKEAGYVKIGEKSIQELVLLPLDELTQFFQEVRLSEHQASVS
KRILIEIRNRLQYLNEVGLQYLTLNRKTATLSGGEFQRIKLATSLGSALVGSMYILDEPS
IGLHPRDTQNLIKVLKKLRDLGNTVIVVEHEEEIMRAADQIIDIGPDAGAHGGHLIFQGT
LEELEKDSDSYTAKYLRDEMQVIIPQTPRKWNEYIEVVGAREHNLKNISVKFPLGILTTI
TGVSGSGKSTLVRQLLYPALAKHLGNHNDESGKMDKLDGNLKTVTSVEMVDQNPIGKSSR
SNPVTYVKAYDYVRALFADQPISKQRGFTPAYFSFNVEGGRCETCQGEGKIKIEMQFMAD
IYLTCEACKGKRFQTEVLEVEYNGKNIADVLDMTVDEALIIFKDSKPIMARLQPLQDVGL
GYIQLGQSSNTLSGGEAQRVKLAAFLTKSASNRANREHILFIFDEPTTGLHFHDIAKLLK
SINALIEHGHSAIVIEHNVEVIRAADWVIDLGKEGGKNGGHLCFEGIPKDLSGLEGNYTG
EFL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtccactacaacagaaaaagccctcgcaaaagaagaaatagcagcagaagaaaagcga
ataaaagaattagaagatattgataccaaacataatattgtcataaaaggcgcacgagtg
aataatctcaaaaatattagtttggctgttcctcgcaacaaacttgtggtgattactggt
gtgtcgggttcaggaaaatcttcattggcttttgatacactttttgcagaaggacaacgt
atgtatgtggaaagtttgagtagttatgctcgtcaatttctgggcagaatggaaaagcca
gatgttgattggattcgtggtgtttctcctgccattgctgttgagcaaaaggtaaataca
cgaaatccacgttctacggtaggaacaacaacagaaatttatgattatctaaaacttctt
ttttcaagaattggaattacctattcgcctatttctggggaaacggtaaagaaagataat
gtgtctgatgtcgttgattttattgaaaattatggagatgatgaaacagaaagcaacgca
aaatatatgattcttgcgcctttagttattcctgaagaacgaacttttgaagaccaatta
aatatccttttgcaacaaggttttacaagaataaaagcaggagaggaagttatttttata
gaacaattattgcccaaagaaattgacccagaattacaaaaaggaaaagaccaaacaaag
caaaatttagaaactttcttagacgaacacaaaggcgaaaatcagaaagattatttagaa
gaaaaaaagaaattaaaaaaagcaggaaaaacaaccaaaaaaactacaaaagcaaaatca
actctttcaaaactcacaaaagaacaacaaactgaactcaaaaggctcaaaaaatttcct
ctttatattttaattgatagaggcgtaatcagaaaaggcgacgagcaaaatcgttttcgt
attgctgattcggttcaaacttcattttatgaaagtaaaggagattgtgttgtagaaatt
tatcaaaaaggaaaagaagtagaaacaacatctttttcagaccgttttgaagctgacgga
atgttatttgaagagccaaatatcaatttttttagttttaatagtccttatggtgcttgt
agaacgtgtgaagggtttggaactgttttaggaattgatgatgatttggttattcctgac
aaaacgatgtcggtttatgaaggtgtgattgcgccttggagaacgccaaaaatgagtaaa
tggcttaatccacttatccaaaaaggaattgattttgactttccaattcatagagcgtat
caagatttaacagaagaacaacaaaaacttctttggactggaaataaatattttcaagga
ttagatgctttttttgaagatttggaaaaagagagtttcaaaattcaatatagagttttg
ttatcaaaatacagaggcagaaaagtatgtccagattgtttgggaacacgcattagaaaa
gaagctggttatgtaaaaataggcgaaaaatcaattcaagaattagttttacttccttta
gatgagcttactcaattttttcaagaagtacgactttcagaacatcaagccagtgtttca
aaacgaattttgatagaaattagaaaccgtttgcaatatctaaatgaagtaggtttgcaa
tatttgactttaaatagaaaaacagcaacgctttcaggtggagagtttcaacgtataaaa
ttagctacttctttgggttctgcattggtgggttcaatgtatattttggatgagccgagt
attggacttcacccacgagatactcaaaatttgataaaagtattgaaaaaacttcgtgat
ttgggaaatacagttattgtagtcgaacacgaagaggaaattatgcgagctgccgaccaa
attatcgatattggtcctgatgcaggtgcgcatggtggacatcttatttttcaaggaact
ttagaagagttagaaaaagattctgatagttatacagcaaaatatttgcgtgatgaaatg
caagtaattattccccaaacgcctagaaaatggaatgaatatattgaagttgtgggcgca
agagaacataatttaaagaatatttcggtaaaatttcctttagggattttgactacaatt
acaggagtttcgggttctggaaaatctactttggtgcgtcaattattatatcctgctctt
gccaaacatttgggaaaccacaatgatgagagtggaaaaatggataaattagacggaaat
ttgaaaacggtaacgagcgtagaaatggtcgatcaaaatccaattggtaaatcttctcgt
tccaatcctgttacgtatgtgaaggcgtatgactatgtacgtgcgctttttgcagaccaa
cctatctcaaaacagcgaggttttacacctgcttatttttcctttaatgtagaaggtgga
cgctgtgaaacttgtcaaggcgaaggaaagataaaaatagaaatgcagtttatggctgat
atttatttgacgtgtgaagcctgtaaaggaaaacgctttcaaacagaagttttggaggta
gagtataatggaaaaaatattgctgatgttttggatatgacggttgatgaagccttgatt
attttcaaagattcaaagccaattatggcacgtttgcagcctttgcaagatgttggtttg
ggttatattcagttggggcagtcttccaatacgctttcaggtggagaggcgcagcgtgta
aaactagctgcatttcttaccaaaagtgccagcaacagagccaaccgagaacatatttta
tttatttttgatgaacctacaacagggttgcattttcacgacattgccaaactcctaaaa
tctatcaacgcactcattgaacacggacactcagccatcgtcatcgaacacaatgtagag
gttattcgtgcagccgattgggtcattgatttaggaaaagaaggaggaaaaaatggtgga
catctttgttttgaaggaataccgaaggatctttctggtttggaagggaattatactggg
gagtttttgtag
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