Bernardetia litoralis: Fleli_1623
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Entry
Fleli_1623 CDS
T02149
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fli
Bernardetia litoralis
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fli03016
]
Fleli_1623
Enzymes [BR:
fli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Fleli_1623
Transfer RNA biogenesis [BR:
fli03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Fleli_1623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFM04038
UniProt:
I4AJA3
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All DBs
Position
1934745..1936094
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AA seq
449 aa
AA seq
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MKIKKYRCSCPHERPFLYKMSKNSNSTNSLGDLLSDLQRNQLGAKKASPKIPNPIYIKTF
EELEKAALKWNKCNQIAIDTEFDDNNNYYGRHLCLVQIYDKDKIYLIDTVKLEGNINPLL
AVLENPNVEKIFHSCSSDLIVVGDVCNCAIKNIQDTALMYRFLLKSHNDIGLQSLVEEKL
NIELEKQEQVSDWAKRPLSKSQLIYAATDVIYLFELFEILKKELQELERWNWYKEEREKL
EEIGEESTNNKSDSENKKVIAALKTAIKYKLPEEQNVRFALYWNLRDEVAKRVNRPHYRV
ISNNLLADLVQRPPKKLEEWQNLRGSSHHFKKRADEFFTLSKVDLSQRKNIFFQELDRRA
EEKEEYFHEKRQHQRTLHQREIIFTNLREALTDYNGLNMQSLILSNKNKNDVLWNGIESV
TNSWKMEVLENIAKQNEWNIDVLKGQLKN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcaaaaaataccgttgctcgtgtcctcacgagcgaccttttttatataaaatg
tccaaaaactctaactcaaccaattcattaggcgatttattaagtgatttgcaacgtaac
caattaggtgcaaaaaaagcttctccaaaaattccgaatccaatttatatcaaaacattt
gaagagctagaaaaagctgctttaaaatggaacaaatgcaatcaaattgctattgatact
gaatttgatgataataataattattatggcagacatctttgcttggttcagatttatgac
aaagacaaaatttatctgattgatactgtaaaattggagggaaatataaaccctttgctt
gctgttttggaaaatccaaatgttgaaaagatatttcatagttgctcttctgatttgatt
gtggtaggagatgtttgtaattgtgctatcaaaaatattcaagatacagcattgatgtat
cgttttcttctaaaatctcataatgatattggcttacaaagtttagtagaagaaaaatta
aatattgaattagaaaaacaagaacaagtttcggattgggcaaaacgacctctttcaaaa
tcacaacttatttatgcagcaactgatgtaatttatttgtttgagctttttgaaattctt
aaaaaagaacttcaagaattagaaagatggaattggtacaaggaagaaagagaaaaatta
gaagaaattggagaagaaagcaccaataataaaagtgattcagaaaataaaaaagtaatt
gctgcactaaaaacagccatcaaatacaaattacctgaagagcaaaatgttcgttttgct
ttatattggaatcttagagatgaagtagcaaaacgagtaaatcgtcctcattatagagtc
atttcgaataatcttttggctgaccttgtacaaagaccacctaaaaaattagaagaatgg
caaaatttacgtggttcttcacatcatttcaaaaaacgagcagatgaattttttacttta
tcaaaagtagatttatcacaaagaaaaaacatttttttccaagaattagatagacgagca
gaagaaaaagaagaatattttcacgaaaaaagacaacatcaaagaacacttcatcaacga
gaaattatttttactaatttgagagaagcactcacagattataatggtttgaatatgcaa
tcacttattctttccaacaaaaataaaaatgatgttctttggaatggaattgaaagtgtt
acaaactcttggaaaatggaagtattagaaaatattgcaaaacaaaatgaatggaatatt
gatgttttaaaggggcagctaaaaaattaa
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