Bernardetia litoralis: Fleli_1691
Help
Entry
Fleli_1691 CDS
T02149
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fli
Bernardetia litoralis
Pathway
fli03030
DNA replication
fli03430
Mismatch repair
fli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fleli_1691
03430 Mismatch repair
Fleli_1691
03440 Homologous recombination
Fleli_1691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fli03032
]
Fleli_1691
03400 DNA repair and recombination proteins [BR:
fli03400
]
Fleli_1691
Enzymes [BR:
fli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fleli_1691
DNA replication proteins [BR:
fli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fleli_1691
DNA repair and recombination proteins [BR:
fli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fleli_1691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Intein_splicing
LAGLIDADG_3
RNase_T
tRNA_anti-codon
Hint
Hom_end_hint
Vint
LAGLIDADG_2
DNApol_Exo
DUF3013
Motif
Other DBs
NCBI-ProteinID:
AFM04099
UniProt:
I4AJG4
LinkDB
All DBs
Position
complement(2012068..2017485)
Genome browser
AA seq
1805 aa
AA seq
DB search
MYLVFDTETTGLPKNFTAPVTDSENWPRLVQIAWQLHDKTGNLLSAQNYIVYPDGFTIPF
NAEKVHGISTKRAQENGKPLADVLNAFADDYQKADILIGHNVEFDVSIMGAEYHRTNIER
GFMEKETLCTKLSSVDFVAIKGGRGGRFKWPTLTELHQKLFGVAFADAHDAAYDVDATAK
CFFGLLQNKVVPTYEDITAEMVVYQAPELDEANFQQTQKKSKASDRLKKDRKLDEILPFV
HLHNHSQFSILQSTANVKKIVTKAHKMGMSAVAITDIGNMHGAFYAVGEGEKLGIKVIIG
AELHLTQDRHKHKFTKDNPDRRTRQVFLAKNQAGYHNLAKMCSFGYVDGYYAGYPRIDRE
LVVKYKENIIATTGGLSAEIPQLILNVGELQAEEAFQWWLEEFRDDFYIQLQRHGLEEEE
RVNEILLSWADKYDVKYFASNDTFYLKKEDADAHDTLLCVKDGIPKSTPVGRGRGYRFGF
PNHEFYFKSGEEMNQLFADLPEAIETTMEIVNKTEVIKLKRDILLPKYDIPKEFDNEDDY
LRHLTYEGAKTRYKEVTPAITERIDHELKIMKNMGFPGYFLIVQDFINEARRIGVAVGPG
RGCLTADAKVVLYNGTTKNICDIQIGDKVITESGTVRKVKNTFVYPTNNKEELLKIKTYY
GETDGITLTKDHKILTEKQIFPTNYENWAESTKKSRSKPRPTGNLEWKEAQDISENDWLF
VPKPKVEIKEIKEFDLADLSENSTLNDLRFDEETIYHDVQNTLCNTIQRTKTQERKIVLD
KDWYKIFGIFTGDGCFRKNERPMISFAFHQDEKESLNFVKNKFEEIGCQVSEQHSKTRKL
IQLSINSKPIYLLFKKLYDEYEFNSATKYVPNFVLSASEENVASFLAGYCAADGHEGEGK
FRFTTVSRKLADQVRFLCWRINIPASLGIDKREEFKNTKTAYYITIPQDKRIGKTKAKAN
YIYEPIKNETHDGFLVKIRSIETVPNQTFVYDFEVEEEHNYLTSSFLVHNSAAGSVVAYC
IGITNIDPILYNLLFERFLNPERVSMPDIDVDFDDVGRQRVIEYVVEKYGRNQVAQIVTY
GTMAAKMSIKDVARVMELPLDESNRMAKLVPEKPGTNLDKAFEEVEELRQIYRAKDLQGE
VLQNAKVLEGSVRNTGTHAAGVIIAPDDITEYIPVCTAKDAELFITQFDGKVVEDAGMLK
MDFLGLKTLTIIKDAIDLIEKNHGVKIDPDEIPIDDKKAYELYQRADTVGTFQFESDGMR
KYLKELKPTNIEDLIAMNALYRPGPMDFIPSYIDRKNGKETVEYPHELLRPILEPTFGIM
IYQEQIMQAAQIMGGYSLGGADILRRAMGKKKAEEMAKQKTIFVEGAKKTHGIDKKKAEE
VFEVMEKFAAYGFNRSHSAAYSVVAFQTGYLKAHYPAEYMAAVMTNNMSSIDKITFFIDE
AQRIGVPVLGPDVNESIERFGVNDKGQIRFGLAAIKGAGETAVSHIITEREETGKYKDIF
DFVERMDLGVINKRTFEALTFAGGLDCFEDIHRAQVFAKTDTGKTNLELLLAYAKAQKEE
AASAQVSMFGGADGKVEVMRPRLAEIEQWTEIDKLNKEKEVVGFFISGHPLDQYKIEMKT
NCSSTLLNIANARKGAELKVGGMVIEVAHRKTATGRDFGLFTLEDYSGTYKFALFGKEYD
HFKGFLIQGEFLLITGRMEERYKSPDQVELKIKNISLLSDVKQKPITSIQIAINLLNLNE
TLIMDLENLFNDCKAGDCKIKMEFFHQAPQTGRTFIKTVSHHLQINPTSDLVRDIEQLGV
VCQVG
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagtatttgacaccgaaaccacaggacttcctaaaaattttactgcacctgtt
acagactctgaaaactggcctcgtttggttcagattgcgtggcagcttcatgacaaaaca
ggaaatttactttctgctcagaattatattgtttatcctgatgggtttacaattcctttt
aatgctgaaaaagttcatggtatttctaccaaaagagcgcaagaaaatggaaaacctttg
gctgatgtcttgaatgcttttgctgatgattatcaaaaagctgatattcttattggacac
aatgtagaatttgatgtcagtattatgggcgcagaatatcatagaaccaatattgaacgt
ggttttatggaaaaagaaacgctttgtacaaaactttcttcggtagattttgtggcaatt
aaaggaggacgtggtgggcgtttcaaatggcctacacttaccgaattgcatcaaaaactc
ttcggtgttgcttttgcagacgctcacgatgctgcttatgatgtggatgcaacagcaaaa
tgtttttttggattattacaaaataaagtagttccgacgtatgaagatattacggctgaa
atggttgtttatcaagcaccagaacttgatgaagctaattttcaacaaactcaaaagaaa
agtaaggcaagtgatagattaaaaaaagacaggaaattagatgagattttgccttttgtg
catcttcataatcactctcaattttctattttacagagtacagcaaatgtcaaaaaaata
gtaactaaggcgcacaaaatgggaatgtcagccgttgccattactgatattgggaatatg
cacggtgcgttttatgctgtgggagaaggcgaaaaattaggaataaaagtaattattggt
gcagaattacatcttactcaagacagacacaaacataaatttacaaaggataatccagac
cgtagaacaagacaagttttcttagccaaaaatcaagctggttatcacaatcttgccaaa
atgtgttcttttgggtatgtagatggctattatgcaggttatccacgtattgatagagaa
ctagttgtaaagtataaagaaaatattattgccacaactggaggtttatcggcagaaatt
cctcagcttattttgaatgtgggagagctacaagcagaagaggcttttcaatggtggttg
gaagaatttagagatgatttttatattcaattacaaagacatggattagaagaagaagag
cgtgtaaatgaaattcttttgagctgggctgataaatatgatgtaaaatattttgcttca
aatgatactttttatctcaaaaaagaagatgctgatgcacatgatacgcttttgtgtgta
aaagatggaattcccaaaagtacgcctgtaggtcgtgggcgtggttatcgttttggtttt
cctaatcacgagttttattttaaatctggcgaagagatgaatcagctttttgcagacctt
ccagaagccatcgaaacgacaatggaaattgtcaataaaacagaagttatcaaattaaag
cgtgatattttattaccaaaatatgatattccaaaagagtttgataatgaagatgattat
ttgcgtcatctaacttatgaaggtgcaaaaacgagatataaagaagttacgcctgccatc
acagaacgcattgaccatgaactcaaaattatgaaaaatatgggttttccaggttacttt
ctgattgtacaagattttataaatgaagctagaagaattggcgttgccgtcgggcctggt
cgtggttgtttgacagccgatgcaaaagttgttttgtacaatggaactacaaaaaatatt
tgtgatattcagattggagataaagtaattacagaaagtggaacagttagaaaagtaaaa
aatacatttgtttatccgactaataataaagaagaattattaaagataaaaacctattac
ggagaaacggacggaattacacttacaaaagaccataaaattctaacagaaaaacagatt
tttccaaccaattatgaaaactgggcagaaagtacaaaaaaatcaaggtcaaaaccacgt
ccaacaggaaatttagaatggaaagaagctcaagatatttctgaaaatgattggcttttt
gttccaaaacctaaagtagaaattaaggaaataaaagaatttgatttagctgatttgagt
gaaaattctactttgaatgatttgcgctttgatgaagaaactatttatcatgatgtgcaa
aatacactttgtaatactattcaaagaacaaaaacacaagagcgaaaaatagttttagat
aaagattggtataaaatatttgggatttttacaggagatggatgttttagaaaaaatgaa
cgtccaatgattagttttgcttttcatcaagacgaaaaagaaagtctaaattttgtaaaa
aataaatttgaagaaattggttgtcaagtaagtgagcaacattcaaaaactagaaaactc
atacaactttcaataaatagtaaaccaatttatttattattcaaaaaattatatgatgaa
tatgaatttaattcagcaactaaatatgttcctaattttgttctttcagcatcagaagaa
aatgtagcttcatttttagctggttattgtgcagcagacggacatgaaggagaaggcaaa
tttagatttacaacggtttcaagaaaattagctgaccaagttcgttttctttgttggcga
attaatattcctgcttctttgggaattgataaaagagaagaatttaaaaatacaaaaacg
gcttattacataacaattccacaagataaacgaattggaaaaacaaaagctaaggcaaat
tatatttatgagccaatcaaaaatgaaacacatgatggttttttagtcaaaataagaagt
atagaaaccgttcctaatcaaactttcgtttatgattttgaagtagaagaagaacataat
tatcttacttcttcatttttggttcataattcggcagcaggttcagtagtcgcttattgt
atcggaattactaacattgacccaattttatacaatctactttttgagcgctttctgaat
cctgaacgtgtatctatgccagatattgatgtggattttgatgatgtgggaagacaacga
gttattgaatatgtagtcgaaaaatatggacgtaatcaagtggcacaaattgtaacgtat
ggaacaatggcagccaaaatgtctattaaagatgttgctcgtgtgatggaacttccattg
gatgagtcaaatagaatggctaaacttgttcctgaaaaacctggaactaacttagataag
gcttttgaagaagtagaagaactacgacagatttatagagcaaaggatttgcaaggagag
gttttacaaaacgccaaagttttggaaggttcggttcgtaatacaggaacgcatgcagca
ggtgtaatcattgcgcctgatgatattactgaatatattccagtttgtacagcaaaagat
gccgagctttttattacgcaatttgatggaaaagtagttgaagatgcaggaatgctcaaa
atggattttttgggtctaaaaactttgacaattattaaagatgccattgatttaattgaa
aaaaatcacggtgtaaaaattgacccagatgaaattccaattgatgataaaaaggcatac
gaactttatcaacgtgctgatacagtaggaacatttcagtttgagtcggacggaatgcgt
aagtatttgaaggaattgaaacctacaaatattgaagatttgattgccatgaatgctttg
tatcgtccaggtccgatggattttattccttcttacattgatagaaaaaacggaaaagaa
actgttgaatatcctcacgagcttttacgaccaattcttgagcctacctttggaattatg
atttatcaggagcaaattatgcaagcagcccaaattatgggaggttattcgcttggtggt
gctgatattttgcgtcgtgcaatgggtaagaaaaaagccgaagaaatggcaaagcaaaaa
accatttttgtagaaggtgcaaagaaaacacacggaattgataagaaaaaagctgaagag
gtttttgaagtaatggaaaaatttgctgcttatggtttcaaccgttctcactcggcagct
tattctgtggttgctttccaaacgggttatttgaaggcgcattatccagccgaatatatg
gcagccgttatgacaaataatatgagtagtattgataaaattacattttttattgatgaa
gctcaacgtattggtgttcctgttttaggacccgatgtaaatgaaagtattgagcgtttt
ggtgtaaatgataaaggacaaattcgttttggattggctgccataaaaggagcaggagaa
acggctgtttcgcatattattactgaaagagaagaaacaggaaagtataaagatattttt
gattttgtagaacgaatggatttaggtgttatcaataaaagaacttttgaagccttgaca
tttgcaggtggattagattgttttgaagatattcatagagcgcaggtttttgcaaaaaca
gatacaggaaagacaaatttagaattacttttagcctatgcaaaagcacaaaaagaagag
gcagcatctgcacaagtttctatgtttggtggagcagatggtaaagtagaggttatgcgt
ccacgtcttgccgaaatagaacaatggacagaaatagacaaactcaacaaagaaaaagaa
gtagtcggttttttcatttctggacacccactagaccagtacaagattgaaatgaaaaca
aattgttcttctacccttctcaatattgctaatgcaagaaaaggagcagagctaaaagta
ggaggaatggtcatagaagtggcacatagaaaaacagcaacaggaagagattttggatta
tttactttagaagattattcaggaacatacaaatttgcgctatttggaaaagaatacgac
cattttaaaggctttttaatacaaggcgaatttcttttgattacaggtagaatggaagag
cgttataaaagtcctgaccaagtagaactcaaaataaaaaatatttctctgcttagtgat
gtcaaacaaaaaccaattacaagcattcagattgccattaatttattgaatctaaatgaa
actttaataatggatttagagaatttatttaatgactgcaaagctggtgattgtaaaata
aaaatggagtttttccaccaagcaccacaaacaggacgtacttttataaaaaccgtttcg
catcatttacaaataaatcctaccagtgatttggttagagatattgagcagttgggcgtg
gtttgtcaggtggggtaa
DBGET
integrated database retrieval system
