Bernardetia litoralis: Fleli_2255
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Entry
Fleli_2255 CDS
T02149
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fli
Bernardetia litoralis
Pathway
fli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fleli_2255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fli03021
]
Fleli_2255
03400 DNA repair and recombination proteins [BR:
fli03400
]
Fleli_2255
Enzymes [BR:
fli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fleli_2255
Transcription machinery [BR:
fli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fleli_2255
DNA repair and recombination proteins [BR:
fli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fleli_2255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
DUF6744
Motif
Other DBs
NCBI-ProteinID:
AFM04632
UniProt:
I4AKZ7
LinkDB
All DBs
Position
complement(2697325..2701725)
Genome browser
AA seq
1466 aa
AA seq
DB search
MSFQKNRKLKNDFKRITISLASPESILNSSFGEVTQPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDQIIYYERYAVVQPGSMEDEGLQRLDFLTEDEYLDIMDKLPREEQQKDD
SDPTKFIARMGAEAIVMLLDPIRLNLDQLSYDLRAAAMNETSQQRKAEALKRLRVVEAFR
DAKSRNVPNEPSWMVIKMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLI
DIKAPEVILRNEKRMLQEAVDSLFDNSRKVNAVRGDGNRALKSLSDMLKGKQGRFRQNLL
GKRVDYSGRSVIVVGPELKLHECGLPKNMAAELFKPFVIRKLIERGIVKTVKSAKKIVDR
KDPVIWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDG
DQMAVHVPLGQEAVLEASLLMLASHNILSPASGSPITVPSQDMVLGLYFLTKGRRSIPEL
KIEGEGMRFYSEEEVVMALNHESISKHAYIFVRTKVLNEETGELEYKTIETVAGRVLFNK
CVPEESGYIDELLSKKTLTKVISKIVKQVGMARAAEFLDEIKFLGFDQAYRGGLSIGINN
IPVPGNKERLVQEAKDEVAAITQNYFMGLITDNERYNQVIDIWTKVNRRITDELMTQLEE
DEQGFNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKNLQGSVGEIIENPILSNFKEGL
DVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDIIVNETDCGTLRGLTVTALKE
QEEIIEPISDRILGRVSLHDVFHPEHDDQIIIESGQLIDEVDAKRAEEAGVEAVEIRSVL
TCETRIGVCAKCYGRNLASGKLVQQGESVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAV
ESTIKAKKEGKIVLEEIRTIDTLDEDGKKGKVVMSRIGELRIVDADNPNKTLASLNIPYG
SFLSVKDGQMVKKDDPLMSFDPFNAVILSQYDGTVQFEGIEEGITYKEESDEQTGHRQKI
IIESRDKTRNPTLTVVNAKGEGASSNVPAGAYLSIEEGQQVIAGQILVKIPRSVSKSRDI
TGGLPRVTELFEARNPSNPAVVSEIDGIVSYGGIKRGNREIFVESKKDGIIKKYMVQLSK
HILVQENDFVKAGMPLSDGAITPADILSIKGPTAVQEYLTNEIQDVYRLQGVKINDKHIE
VIVRQMMQKVEIIDPGDTYFLPNQIVDKFEVRAENDSFMDKKIVTDVGESTKLKVGMIIT
ARALRDENSSLRRKDMKIAKVREAQPAVSKPTLRGITQASLGTKSFMSAASFQETTKVLS
EASIRGKSDDLNGLKENVIVGHLIPAGTGLRKYEDLIVYDEKTYDKLEDTLADENVKSTR
TEAQLNRMRLEALEAENEEETTQTVG
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccaaaagaacagaaagttaaaaaacgatttcaagcgaattactatcagcttg
gcatctccagaatctatccttaatagttcgttcggagaagttactcaaccagaaacgatt
aattatcgtacctacaaaccagaaatgggaggtcttttctgtgagcgtatcttcggacct
gttaaagattgggagtgtcattgtggaaagtacaagcgaattcgctataaaggaattatc
tgcgaccgttgtggcgtagaagtaacggaaaagaaagtccgtcgtgagcgcatgggacac
attcaacttgttgttcctgtggcgcatatatggtatttccgttcattgcctaataaaata
ggttatttgctcggtctgccaaccaaaaaactagaccagattatttattacgagcgttat
gccgtagtacaacctggttcaatggaagatgaaggattacagcgtttagacttcttgact
gaagacgagtatttggacattatggacaaattacctcgtgaagaacaacaaaaagatgac
tctgaccctacaaaattcattgcaagaatgggagctgaagcaatcgttatgcttcttgac
ccaattagacttaatttagatcaactttcttatgatttgcgtgctgctgcaatgaacgaa
acttcacaacaacgtaaggctgaagccttaaaacgtttgcgtgtagtagaagcattccgt
gatgcaaaatctagaaatgttccgaatgagccatcttggatggttataaaaatggtacct
gttattccacctgaattgcgtcctttagttccccttgatggtggacgtttcgcaacttcg
gatttgaatgatttgtatcgtcgtgttattattcgtaacaatcgtcttaaaagattaata
gatataaaagctcctgaagtaattttacgtaatgaaaaacgtatgcttcaagaagcagta
gattctcttttcgataactctcgtaaagtaaacgctgttcgtggtgatggaaaccgtgct
ttaaaatcactttcagacatgctcaaaggtaaacaaggacgtttccgtcaaaaccttttg
ggtaagcgtgttgattactcgggtcgttcggtaatcgtggtaggtccagaactcaaactt
catgagtgtggtcttcctaaaaatatggctgccgagctattcaaaccgtttgttatccgt
aaacttattgagcgtggtatcgtaaaaacggtaaaatcagctaagaaaattgttgataga
aaagaccccgttatttgggatattttggaaaatgtattgaaaggacatccagttctcctt
aaccgtgcgcctacattgcaccgtttgggtattcaagcattccaaccaaaacttattgaa
ggaaaagcaattcaattacatccattagtttgtacagcatttaatgccgattttgatggt
gaccagatggccgttcacgttcctttgggacaagaagctgttttggaggcctctttatta
atgcttgcttctcataatattctttctcctgcaagtggtagtccgattactgtaccttca
caggatatggttttgggtctttatttcttgacaaaaggaagaagaagtattccagaattg
aaaattgaaggagaaggcatgcgcttttactcagaagaggaagttgtaatggctctcaat
catgaatctatttctaaacacgcctatatatttgttcgtacaaaagtattgaatgaagaa
acaggcgagttagaatataaaactatagaaacagtcgcaggacgtgttttatttaataaa
tgtgttcctgaagaatctggttatattgatgaacttttaagtaaaaagacacttacaaag
gtaatctctaaaattgttaaacaagtcggtatggctcgtgctgccgaattcttagatgag
attaaattcttaggttttgaccaagcctatagaggtggtctttctattggtatcaataat
attcctgttccaggaaataaagagcgtttagttcaagaagcaaaagacgaagtagcagcg
attactcaaaactatttcatgggtcttattactgacaacgagcgttacaaccaagtaatt
gatatttggacaaaagtaaaccgtagaattacagatgaactgatgactcaattagaagag
gatgaacaaggatttaactctatctatatgatgatgcactctggcgcacgtggttctcgt
gaacaaattcgccagcttggtggtatgcgtggtcttatggcaaaacctcaaaagaactta
caaggttcggtaggtgaaattattgaaaaccctattctttctaactttaaggaaggacta
gatgttttggaatactttatctctactcatggtgctcgtaaaggtcttgcagatacagct
cttaaaactgccgatgctggttatcttactcgtcgtttagtagatgttgctcaagatatt
atcgtaaatgaaactgattgtggtactttacgtggcttaacagtaacagctcttaaagaa
caagaagaaattattgaaccaatttctgaccgtattttaggtagagtttctttacatgat
gttttccatccagaacacgatgatcaaattatcattgaatctggacaacttatagatgaa
gttgatgccaaacgtgctgaagaggcaggtgtagaagccgtagaaatacgctctgtactt
acttgtgaaactcgtattggtgtttgtgctaagtgttatggacgaaatcttgcttctgga
aaactagttcagcaaggtgagtcagttggtgtaattgctgcacaatctattggagagcca
ggtacacagcttacacttcgtactttccacgttggtggtacagcctctaatattgccgta
gaatctactattaaagctaaaaaagaaggtaaaattgttttagaagaaattagaacaata
gatacacttgatgaagatggcaaaaaaggaaaagtagttatgtcacgtattggcgagctt
cgtatcgttgatgctgacaatcctaataaaacattagcttcccttaatattccttatggt
tcattcttgagcgtaaaagatgggcaaatggttaagaaagatgatcctttaatgagtttt
gatccttttaatgctgttattctttctcaatatgatggaactgttcagtttgaaggtatt
gaagaaggcatcacttataaagaagaatcagatgagcaaactggtcaccgtcagaaaata
atcattgaaagtagagacaaaacacgaaatcctacccttactgttgtaaatgcaaaagga
gaaggagcaagtagtaatgttcctgctggtgcttatctttctattgaagaaggtcagcaa
gttatagctggtcaaattctggtaaaaatccctcgttcagtttctaaaagtagagatatt
acaggtggtcttccacgtgtaactgaactttttgaagctcgtaatccttccaacccagca
gtagtatcagaaattgatggtattgtaagttatggtggtatcaaacgtggtaacagagag
atttttgtagaatctaagaaagatggtattatcaaaaaatatatggttcagctttctaag
catattcttgtgcaagaaaatgactttgtaaaagcaggtatgccactttcagatggtgct
attacgccagcagatattctttctatcaaaggacctacggctgttcaagaatatttgact
aatgaaatccaagatgtatatcgcttacaaggtgtaaaaatcaatgataagcatattgag
gtaattgttcgtcagatgatgcaaaaagtagagattatcgatccaggtgatacttatttc
ttgccaaatcaaattgtagataaatttgaagttcgtgcagaaaatgattcatttatggat
aagaaaattgttactgatgtaggagaatctaccaaacttaaagtaggtatgattattaca
gctcgtgcgcttagagatgaaaattctagtttacgtcgtaaagatatgaaaattgctaaa
gtgcgtgaagcacaaccagcagtttcaaaacctactttgcgtggtattacacaggcatca
ttgggcacaaaaagtttcatgtcagcagcttctttccaagagactaccaaagtattaagt
gaagcctctattcgtggtaaatctgatgacttgaatggtcttaaagaaaatgtaattgta
ggacaccttattcctgcaggtacaggtttgcgtaaatatgaagaccttatcgtttatgat
gagaaaacgtatgacaaacttgaagatacattagctgatgagaatgtaaaatctactcgt
acagaagcgcaactaaaccgtatgcgtttagaagcattagaagcagaaaacgaagaagaa
actactcaaacagtaggttaa
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