Bernardetia litoralis: Fleli_2672
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Entry
Fleli_2672 CDS
T02149
Name
(GenBank) LysM repeat-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
fli
Bernardetia litoralis
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fli01002
]
Fleli_2672
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fli01011
]
Fleli_2672
Peptidases and inhibitors [BR:
fli01002
]
Cysteine peptidases
Family C40
Fleli_2672
Peptidoglycan biosynthesis and degradation proteins [BR:
fli01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Fleli_2672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
AFM05029
UniProt:
I4AM44
LinkDB
All DBs
Position
complement(3198981..3201104)
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AA seq
707 aa
AA seq
DB search
MATYHTVQSGDTLWGISRQYQISVDEIRSLNNMADSSLSLGQRLQVSQSDPVYYGGSTAA
ASSPNATIYTVQAGDSLWRIATKFNISVNEIKALNNLSSNSLSLGQQLRVSGGSSYTAPV
VTPTIQTNSPTIVKAPVFTPRPSYIVQAGDSMWRVSQKIGVSVNELKSINNLSSNILRIG
QMLYLEAKPEVASQAAPVQTPQPTQAAPKIIYHTVISGDSLYRIAMAYNVSVQDIKESNG
LSSNSLSLGQRLMITKKAKTTSYSSSSSSSNNSGSGSNVDTSIGNAKDNSSSVSETGNIS
KYEQNKKEVINLDAINGVQIFGSGLSASVGRGGSNRQTDVEKVQERFVQLNYMNSVDGLS
QIQATISAIDNFQQRNKIDWWAGKSSLIGASGYSSGLIKPNDVTYKLLREHTKYNITYKD
HKGNLEKVSFSNFVRSNYSVYPYGISYSGTVVHDIPASYYESVGLSRQLAEALEFVSKNE
GKFDAINSYDKAAFSFGFIQFAGQTGGGTFPHMMALIKDRNPSLFEEAFGRFGIDVEYTY
KNDKYNPANMVVFTPDGKRYEGTDAEKYIRSDKVLHGVFVRAGQNIEVAKLQVLAAVQEY
VKPALRAKISLNANGLDVNSEPITDFINSAGGITVLIDLAVNQGLTGALRIFAPAMEQVM
KQSGITSLAALKNIDEKRVIQTIVANATDSRVRTRPQKVLDAGISFS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttatcatacagtacagagtggcgacacgctttggggaatttctaggcaatat
caaatttcggtagatgaaattcgaagtcttaataatatggcagattctagtctttcatta
ggacagcgtttgcaggttagccaatctgatcctgtttattatggaggaagtacagctgct
gcctcttcgcctaatgctactatttatacagtacaggctggtgattcactttggagaatt
gctacaaaatttaatatttctgtaaatgaaataaaggcattaaataatctttcgtcaaat
tccctttcactaggtcagcaacttagagttagtggaggaagtagttatactgcgcctgtt
gttacacctactatccaaaccaattcgccaacaattgtaaaagctcctgtttttacacct
cgtccgagttatattgtacaagctggagatagtatgtggagagtttctcaaaaaatagga
gtttctgtaaatgaattaaaaagtatcaataatttgagtagtaatattctaagaattggt
cagatgctttatttggaggcaaaacctgaagttgcttctcaagctgcgccagttcaaact
cctcaacctactcaagcagcaccaaaaattatttaccataccgttatttcaggagattct
ttgtacagaattgcgatggcatataatgtttctgttcaagatattaaagaaagtaacgga
cttagctcaaactctctttcactaggtcagcgtttgatgattacaaaaaaagccaaaact
acaagttatagttcttcttcatctagctcaaataattctggaagtggaagtaatgtagat
acaagtattggaaatgcaaaagataactcttcttctgtatcagaaacaggaaatatttca
aaatacgaacagaataaaaaggaagttattaatcttgatgcaataaatggtgttcagatt
tttggaagtggactttctgcaagtgttgggcgtggtggctcaaaccgtcagacagatgta
gaaaaagtacaagagcgttttgtacaattaaattatatgaattctgttgatgggctttca
caaattcaagctaccatttcagccattgataattttcaacaaagaaataaaattgattgg
tgggcaggaaaatcttctttaattggtgcttcgggttattctagtggacttattaagcca
aatgatgttacttataaattacttagggagcatacaaaatataatattacttacaaagac
cacaaaggaaacctagaaaaagttagtttttcaaattttgtgagaagtaattatagtgtt
tatccgtatggaatttcgtattcaggaacagtagttcatgatattccagcatcttattat
gaaagtgttgggctttctcgtcagcttgccgaagccttagaatttgtatctaaaaatgaa
ggaaaatttgatgcaataaatagctatgataaagctgctttttcttttgggttcattcaa
tttgcaggacaaacaggaggaggaactttccctcacatgatggcactcataaaagataga
aatccttctttgtttgaagaagcctttggaagattcggaattgatgtagaatatacttac
aaaaatgataaatacaaccctgcaaatatggttgtgtttacaccagatggaaagcgttat
gaaggtacagatgcagaaaaatatattcgttctgacaaagttttgcatggtgtgtttgta
agagcaggacaaaatatagaagtagccaaattacaagttttggcagccgttcaagagtat
gtaaaacctgcacttagagccaaaatttcattgaatgcaaacggtcttgatgtaaatagc
gaacctattacagacttcataaattcagcaggaggaataactgttttgattgatttagct
gtaaatcaagggcttacaggagctttaagaatttttgcgccagcaatggaacaagtaatg
aaacaatcaggaattacttcattagctgcacttaaaaatattgatgaaaaacgagtaatt
caaactattgtagccaatgcaacagattcaagagtgcgtactcgtcctcaaaaagtgctt
gatgctgggattagctttagttaa
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