Bernardetia litoralis: Fleli_3078
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Entry
Fleli_3078 CDS
T02149
Name
(GenBank) PAS domain S-box
Organism
fli
Bernardetia litoralis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
SpoIIE
PAS
PAS_9
GAF_2
PAS_3
PAS_8
HAMP
GAF
dCache_1
HAMP_2
GAF_3
Rootletin
DsbC_N
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AFM05418
UniProt:
I4AN83
LinkDB
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Position
complement(3675987..3679454)
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AA seq
1155 aa
AA seq
DB search
MLNRFSIRTKITIRLLIVVLIAAFVLSGVSYNRGKEAIEQRYWQNLKVINTLKSKEIQGV
FSQINSHVSLLQGYSSVLQSLRKVNTIAENKYTDTLKNQLNNKLNKSLLPFQKTYNYPNL
VLVNKDGRIIYKTNPKADYLIFGRIYDRYQEILTYAQDGIYFNEPRVAKELSGNLSRMEA
IAPVYDPEQNGLKIGYIIVELDMQVVYDVVSDTTGLGQTGEIVLGRQKSKTTLTFLNKLK
KQHHNTPKIIGDGKAEGLERALKEKTTGYGFSIDYKGSETLSAWNYIEPVGWGIVTQIDK
SAVDNDLNGLVMAFILTGGVIIIVAGGVVFGFSTVLTRPIERLQVVLGIVAKGELPKEIK
KETNDEIGQMTEAVNNLVQALKRTADFAYQIGKGNYKASFKPMGDNDTFGNALITMRDSI
QDADSKDKQRNWIVSGVAEVGEILREYQTIEELSEKIIAFITEKINAVQGSFYIVEEDEI
TQESSIVMRATYAYHKRKYLKKSFRFAEGLVGQAAIEQDIILRTEIPDNYMTISSGLLGE
QKPKALLIVPLITDEKVYGVLEFAGLSCFTDTEVNFVREISIIIARTIFNIKINDRTISL
LQESQQMSEELQLQQEVLRQNAEEMESTQEELRKSNARLEEQILEVNRTQKRMQVLLENA
SEVITIYEKNGKVRYISPSIESILGYEQSELIGTNDVDNVQQGSKETFKQLFENLLEHPD
ENITIQYEYRKKNGDPVWLEATGTNRLSDPAIRGIVINSRDITERRRAEQESRMRGQMQA
LSENSPDLIMRINPEGKIFYVNPTIKNLTGLEPSLLTNKMMKGSELPIAIVNRIEEITDK
VNRTGNKVLRELEIDSVAGERVMQTTAIPEYNDQAYLESILVVSHDITERKRNEFEVRET
NRKISESINYARRIQSAILPESRHLQSIFSDSFIFYKPRDIVSGDFPWYVQKGDDVYIAA
VDCTGHGVPGALISLIGYFILNEIISSSQTILSPAQILDRLNKGVAQTLRQDTEGNTKDG
MDIALCHINTKQNKVEFAGAHRPLYILPKEGDLIQIKGDRKPIGGGAIYNASSDFSNHSQ
TISEGDSIYIFSDGLPDQFGGEEDKKFSSKQIRELLIKNRTQNMEEMHTTFENRFEEWMG
NNKQIDDILMIGIKF
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatcgattcagcattcgtactaaaatcacgatacgactcttaatagtagtgctt
attgctgcatttgtgcttagtggagtttcttataatcgtggaaaagaagctatagaacag
cgttattggcaaaatctaaaagtaatcaatacactcaaaagcaaagagattcaaggtgtt
ttttctcaaattaattctcatgtcagtttacttcaagggtattcatctgttttacaatca
ctccgaaaggtaaatacaattgctgaaaataaatatacagatacattaaaaaatcagtta
aacaataaattaaataaatcccttcttccttttcaaaaaacatacaattatccaaactta
gttcttgtaaataaagatggtcggataatttataaaacaaatccaaaagctgattatctt
atttttggaagaatatatgaccgttatcaagagattttgacatatgctcaagatggaatt
tattttaatgaaccaagagtagccaaagaactttcaggcaatcttagtagaatggaagct
atcgcacctgtttatgacccagaacaaaatggtctaaaaatcggctacatcatcgttgaa
ttagatatgcaagtagtctatgatgttgtttcagatacaacaggattaggacaaacagga
gaaattgttttgggaagacagaaaagtaaaactacccttacctttttgaataaattgaag
aaacagcaccacaatacacccaaaattataggtgatggaaaagcagaaggattagaaaga
gcattaaaggaaaaaacaacaggatatggattttcaatagattataaaggaagtgagaca
ctttcagcatggaactatattgagcctgttggttggggaattgttacgcaaattgataaa
agtgccgtagacaatgacttgaatggacttgtgatggcctttattttgactggtggagtc
attattattgttgctggtggagttgtttttggtttttctactgttcttactcgtcctatc
gaaagattacaagtagtgttaggaatcgtagcaaaaggagaattacctaaagaaattaag
aaagaaaccaatgatgagattggtcaaatgaccgaagctgttaataatcttgttcaagct
ctaaagcgaacagcagactttgcctatcaaattggaaagggaaattataaagcctccttt
aaaccaatgggagataatgacacctttggaaatgccttgattacgatgcgagatagcatt
caagatgcagatagcaaggacaaacaaagaaactggattgtgtcaggtgtagcagaagta
ggtgaaattttgcgtgaatatcaaacaattgaagagctttcagaaaaaattatcgctttt
attacagaaaaaataaatgctgttcaaggtagtttttatatcgtagaagaagacgaaatt
acacaagaaagtagtattgtaatgcgtgcaacctatgcgtatcacaaaagaaaatacctt
aaaaaatcatttcgttttgcagaaggattagtaggacaagcagccattgagcaagatatt
attcttcgcacagaaattccagataattacatgaccattagttcgggacttttaggagaa
caaaaaccaaaggctttacttatcgttcctctaattacagatgaaaaagtgtatggagtg
ttagaatttgcaggactttcttgttttacagatacagaagtaaattttgttcgtgaaatt
agtattatcattgccagaacgatttttaatataaaaatcaatgatcgtactatttctctt
cttcaagaatctcagcaaatgagtgaagaacttcaattacaacaagaagttttgcgccaa
aatgccgaagaaatggaatctacacaagaagaactccgtaaatctaatgcccgactagaa
gagcaaattttagaagtaaatcgtactcaaaaacgcatgcaggttttattagaaaatgct
tctgaagtaattacaatttatgaaaaaaatggaaaagtacgttatataagtccatctatt
gaatccattttgggttatgaacagtctgaactcataggtacaaatgatgtcgataatgtt
caacaaggaagtaaagaaacattcaaacagctttttgaaaaccttttggaacacccagac
gaaaacattaccattcaatacgaataccgtaagaaaaatggcgaccctgtttggttagaa
gccacaggaacaaaccgtttgagcgacccagcaattagaggaattgttatcaactctagg
gatattacagaacgaagacgtgccgaacaagaatcacgtatgcgtggacaaatgcaagca
ctttctgaaaattctcctgaccttatcatgcgtatcaatccagaaggcaagatattttat
gtcaatccgacaatcaaaaatcttactggtttagaaccttctttactgacaaataaaatg
atgaaaggttcagaattacctattgccattgtcaatcgaattgaagagattacagacaaa
gtaaatcgaacaggaaataaagttcttagagaattagaaattgattccgttgcaggagaa
cgtgtcatgcaaaccacagctattccagaatacaacgaccaagcctatttagaatctatt
ttggtagtatctcatgatattacagaacgtaaaagaaatgaatttgaggtaagagaaacc
aaccgtaaaatttcagaaagtatcaattatgcaagacgtattcagagtgcaatattgcct
gaaagtcgtcatttacaaagtattttttcagattcatttattttctacaaacctagagat
attgtaagtggagattttccttggtatgtacaaaaaggcgacgatgtgtatattgctgcc
gttgattgtacaggacatggagtaccaggagctttgatttcacttattggctattttatt
ttgaatgaaataataagctctagtcaaacaatactttctcctgctcaaatattagacaga
cttaataaaggagttgcacaaacattaagacaagatacagaaggaaataccaaagacggt
atggacattgctctttgtcatattaatacaaaacaaaataaagtagaatttgctggagcg
catcgtcctctatatattttgccaaaagaaggcgatttaatacaaataaaaggtgataga
aaaccaattgggggaggtgctatttataatgcaagtagtgattttagtaatcatagccaa
actatttcagaaggagattctatttatattttctctgatggtctgcctgaccagtttgga
ggagaagaggataaaaagttttcatcaaaacaaatacgtgaacttttgataaaaaataga
actcaaaatatggaagaaatgcacactactttcgaaaaccgttttgaagaatggatggga
aataacaagcaaattgatgatattttaatgatcggtattaagttttaa
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