Bernardetia litoralis: Fleli_3592
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Entry
Fleli_3592 CDS
T02149
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fli
Bernardetia litoralis
Pathway
fli03030
DNA replication
fli03430
Mismatch repair
fli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fleli_3592
03430 Mismatch repair
Fleli_3592
03440 Homologous recombination
Fleli_3592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fli03032
]
Fleli_3592
03400 DNA repair and recombination proteins [BR:
fli03400
]
Fleli_3592
Enzymes [BR:
fli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fleli_3592
DNA replication proteins [BR:
fli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fleli_3592
DNA repair and recombination proteins [BR:
fli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fleli_3592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFM05910
UniProt:
I4APM5
LinkDB
All DBs
Position
complement(4288568..4289182)
Genome browser
AA seq
204 aa
AA seq
DB search
MDFITIDFETANFQRNSACEIGLTFVKDNQITETKSWLIRPKINHFEPMNVSIHGITAAD
VWEQPRFDELWKSELKGLLENQFLIAHNASFDFSVLRKTLDDYDLPYPDLSYSCSYLFAK
KIWTEMPRYDLKTLCNQNEIYFRHHRAGSDADATAQLALKGFEKVNVTCQQTFSEKLEIT
VGKLFKGGYIPSTNHKKAKRKKVY
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggattttataacaatagacttcgaaactgctaattttcagagaaatagtgcttgtgaa
ataggacttacttttgtcaaagataatcaaatcacagaaacaaaatcgtggcttattcgc
ccaaaaatcaatcattttgaaccaatgaatgtttctattcacggaattacggctgctgat
gtatgggaacaacctcgttttgatgaactttggaaatcagaattaaaaggtttattagaa
aaccagtttttgatagcccataatgcaagttttgatttttcggtgctacgcaaaacgtta
gatgattatgacttgccttatccagatttatcctattcatgtagttatttgtttgccaaa
aagatttggacagaaatgcctcgttatgatttaaagacactttgtaatcaaaatgaaatt
tattttcgtcatcacagagcaggttcagatgctgatgcaacagcacaattagctctaaaa
ggttttgagaaagtcaatgttacttgtcagcaaaccttttctgaaaaactagaaattacg
gttggaaaactttttaaaggtggttatattccttctaccaatcataaaaaagcaaaaaga
aagaaagtgtattga
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