Bernardetia litoralis: Fleli_3853
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Entry
Fleli_3853 CDS
T02149
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fli
Bernardetia litoralis
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fli01002
]
Fleli_3853
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fli01011
]
Fleli_3853
Peptidases and inhibitors [BR:
fli01002
]
Cysteine peptidases
Family C82
Fleli_3853
Peptidoglycan biosynthesis and degradation proteins [BR:
fli01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Fleli_3853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF6906
Motif
Other DBs
NCBI-ProteinID:
AFM06158
UniProt:
I4AQC3
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All DBs
Position
4613504..4615009
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AA seq
501 aa
AA seq
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MGYLKNSGSAGLNEDAYSLSDIDEIQNALLGTHGEYDLPKLMKIDVFTTAMALTYLNHTY
AGRIKPNEVDSKENIWVEKYKPVDLVDELYSAIQNNRIDLIIERAEPQYELYEKLKIARE
EYKRIVAEGGWEKINLEDFKKIKIDSTEEFNHHVLVPTIRNILNKTGDLQLAKNEVADTS
QIYDNKLREAVMNFQERHTLERDGIVGMNLLKEMATSAEDRLTQIELNMERLRWLSDSLG
DNYIIVNVPSYWMRLYDSGKRSFETKVMVGQSFHETPLFMDTMKYIVLSPKWHVPISIMT
NELLPKLRRGGNYFSRNNFSIYQRTSDGIKEISPNAVNWNAVRNMGNYSIVQNAGASNAL
GRVKFIFPNANNIYMHDTPSTQFNKANRALSHGCIRLYEPEKLANYILKEKADTWTPEKI
HKAMYSGDTKNVYLSRQWVVHIVYWTTWVDDTGKVHFAKDVYGYDKAQREILAKRDINLK
NWMQKRTKEFENLKRKEIALR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggttatctcaaaaattcgggttcggcaggtctgaatgaagatgcctattcacttagt
gatatagatgaaatacagaatgcgcttttgggtacacatggagaatatgatttgcccaaa
ctcatgaaaattgatgtctttactactgcaatggctcttacttatctcaatcacacttat
gcaggacgtataaaacccaatgaagtagatagcaaagagaatatttgggtggaaaagtat
aaacctgttgatttagtagatgaactttatagtgcaattcaaaataataggattgacctt
attatcgaaagagctgaacctcaatatgaattgtacgaaaaactaaaaatcgcaagagaa
gaatataaaagaatagtagcagaaggtggctgggaaaaaattaatcttgaagatttcaaa
aaaataaaaatagatagtacagaagagtttaatcatcatgtacttgtgcctacaattcga
aatattcttaacaaaacaggagatttacaacttgctaaaaatgaggtagctgacacttct
caaatttatgataacaaacttcgtgaagctgtcatgaattttcaagaacgtcatacatta
gaaagagatgggatagtaggaatgaatttgcttaaagaaatggctacctcagcagaagac
cgattgacacaaatagagttgaatatggagcgtttacgttggttaagtgattcattagga
gacaattatattattgttaatgttccttcctattggatgcgtttgtatgattctggcaaa
cgtagttttgaaactaaagtaatggtagggcaatcttttcatgaaacacctctatttatg
gacaccatgaaatatattgttctgagtccaaagtggcatgttcctatcagtatcatgact
aatgaattattaccaaaacttcgtcgtggaggtaattatttttcaagaaataattttagt
atttatcaacgtacaagcgatggcataaaagaaattagtccaaatgctgtaaattggaat
gctgtcagaaatatgggtaattattctattgtccaaaatgctggtgcatcaaacgcatta
ggtagagtaaaatttatttttccaaatgcaaataatatatatatgcatgatacgccttct
acacaatttaataaagcaaacagagctttaagccatggttgtattcgtctttatgaacct
gaaaaattggctaattatatcctaaaagaaaaagctgacacttggacacctgaaaaaata
cacaaagctatgtatagtggagataccaaaaatgtatatttaagcagacaatgggttgtt
catattgtttattggacaacttgggtagatgatactggaaaagttcattttgcaaaagat
gtgtatggctatgataaagctcaacgagaaatattagccaaacgtgatatcaaccttaaa
aattggatgcaaaaacgtactaaggaatttgaaaaccttaaaagaaaagagattgccttg
agataa
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