Bernardetia litoralis: Fleli_3986
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Entry
Fleli_3986 CDS
T02149
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
fli
Bernardetia litoralis
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fli03016
]
Fleli_3986
Enzymes [BR:
fli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Fleli_3986
Transfer RNA biogenesis [BR:
fli03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Fleli_3986
Prokaryotic type
Fleli_3986
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFM06288
UniProt:
I4AQQ3
LinkDB
All DBs
Position
4782938..4783855
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AA seq
305 aa
AA seq
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MNFELTILGANAAIPAHGRFPTSQVLCVNHRYYLIDAGEGVQIQLVKYKIKINKIHAIFI
SHLHGDHYLGLMGLLNTMSLRGRTEPIYLHAPKGLQEIIILQLKYSYTVLNYPLHFIETN
QEESVFLFEDEKVTVHTIPLTHRIPCCGFLFREKAKDKNLIKEKIPVDLSVAGRIALKKG
EDFEHNNQILKNEDYTHVPNKRRSYAFCSDTIYLPSSPLIKIIQNVDLLYHEATFMHTDE
KRAAQTFHSTAQQAALIAKEANVKQLILGHFSTRYYDLVPALEEAQEVFPNSLLAIEGEA
FPINE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttgagctaactatattaggcgcaaatgctgccattcctgcccatgggcgtttt
ccaacctcacaagttttgtgtgtcaatcatagatattatttgattgatgctggtgaaggt
gtacaaatacaattggttaaatataaaataaaaataaataaaatacacgctatttttatt
agtcatcttcatggcgaccattatttagggcttatgggacttttgaatacaatgagtttg
cgtggacgcacagagcctatttatttgcatgcacccaaagggcttcaagaaattattatt
ttgcagctcaaatattcttatacagttcttaattatccacttcattttatagaaacaaat
caagaagaatccgtatttttatttgaagacgaaaaagtaacagtacatactatccctttg
acacataggattccttgttgtgggtttttgtttagagaaaaagcaaaggataaaaatttg
attaaagaaaaaattcctgttgatttgtctgttgctggacgaattgcactcaaaaaagga
gaagattttgaacataataatcaaattttgaaaaatgaagattatacacatgtgcctaat
aagaggcgaagttatgccttttgttcagatactatttatttaccttcttcacctttgata
aaaattattcaaaatgtagatttattatatcatgaagctacttttatgcatacagatgaa
aaacgtgcagcccaaacttttcattcgacagctcaacaagctgcccttattgccaaagaa
gcaaatgtaaaacaacttattttagggcatttttctactcgttattatgatttagtacct
gcgttggaagaggctcaagaagtgtttccaaattctctcttggcaattgaaggcgaagca
tttcctataaacgaatag
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