Flammeovirga pectinis: EI427_02915
Help
Entry
EI427_02915 CDS
T05771
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fll
Flammeovirga pectinis
Pathway
fll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI427_02915 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fll03019
]
EI427_02915 (rny)
Messenger RNA biogenesis [BR:
fll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EI427_02915 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
AZQ61207
UniProt:
A0A3Q9FLD6
LinkDB
All DBs
Position
1:complement(714621..716222)
Genome browser
AA seq
533 aa
AA seq
DB search
MEPNIILAAVVCLLVGIAIGRFLLARVLKGMETSAIDKANSILEDAEKEAESIKRTKLIE
SKEKFLKAKQDFDSETAKRKNQLNVNENKLKQFENRLKQQEAKQKQKEAVLAKQVESFKK
KDQEMEQRFEELAVQKEFTFKAKAEAENLRLKQVEQLEKVANLKAEDAREQLVEALKDEA
KTKASMHIKNIMEEAKMTATKEARKTVITTIQRTAAEQAIENCVSVFNLESDELKGKIIG
REGRNIRALEASTGVEIIVDDTPEAIIISGFDPVRREIARVSLHRLVADGRIHPARIEEV
VSKTRKNIEDEIIEIGERTVIDLGIHGLHPELIKLIGRMRFRSSYGQNLLQHSREVSNLA
STLASELGLNSKVAKRAGLLHDIGKVWPEEPEVPHAILGMNLAQKYGETPEVCNAIGAHH
DEIEMTSLISPIVQACDAISGSRPGARREMMESYIQRLKELEGLAMDFKGVHKCYAIQAG
RELRVMVDAEKVPDTDAGQLSFDIANKIETEMQYPGQIKVTVIRETRSVHFAK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaacataattttagctgccgtagtctgcttactagtaggtatagcaatcggt
agatttttattagctagagtcttaaaagggatggaaacatctgctattgataaagctaat
agtatactagaggatgctgaaaaagaagccgaaagtataaagagaacaaagttaattgaa
tcaaaagaaaaattcttgaaagcaaaacaagattttgattctgaaactgcaaaaagaaaa
aatcagcttaacgtaaacgagaacaaattaaagcaatttgagaaccgtttaaagcaacaa
gaagcaaagcaaaaacaaaaggaagctgtattagcaaagcaagttgagtctttcaaaaag
aaagatcaagaaatggaacaacgttttgaagaacttgctgttcagaaagagtttactttt
aaagcaaaagctgaagctgaaaatttacgtcttaagcaagttgaacaattagaaaaagtt
gccaacttaaaagctgaagacgctagagagcaattagttgaagcgttgaaagatgaagcc
aaaacaaaagcttctatgcatattaaaaatatcatggaagaggctaaaatgacagcaact
aaggaagctcgtaaaactgttattacaactatacaaagaactgccgctgaacaagcgata
gaaaattgtgtatcagtatttaacctagaaagtgatgaacttaaaggtaaaattattggt
agagaaggacgaaacattagagctcttgaagctagtacaggtgtagaaattattgtagat
gatactcctgaagcaatcattatttctggttttgaccctgttagaagagaaattgcaaga
gtttcactacatagattagtagcagatggacgtatccaccctgctcgtattgaagaagtt
gtttctaaaactcgtaaaaacattgaggacgaaattatcgaaatcggtgaaagaactgta
attgacttaggtattcatggtttacaccctgaacttattaagttaattggtagaatgaga
ttccgttcttcttacggacagaacttattacaacactctagagaggtatctaacttagca
agtactttagcttctgaacttggattaaattctaaagttgctaaacgtgccggcttatta
cacgatattggtaaggtttggccagaagaacctgaagttcctcacgctatcttaggtatg
aacctagctcaaaaatatggagaaactccagaagtttgtaatgctattggtgctcaccac
gatgaaattgagatgacttcattaatctctcctatcgttcaagcatgtgacgctatcagt
ggttctagacctggtgctagacgtgaaatgatggaatcttacatacaacgtcttaaagag
cttgagggcttagcgatggactttaaaggagttcacaaatgctatgcaatccaagcaggt
agagagttacgtgtaatggtagacgcagaaaaagttcctgatactgatgctggtcaatta
tcttttgacattgcaaataaaatcgaaactgaaatgcaatatccaggacaaattaaagta
acggtaatccgtgaaacaagatctgttcactttgcgaagtaa
DBGET
integrated database retrieval system
