Flammeovirga pectinis: EI427_03795
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Entry
EI427_03795 CDS
T05771
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fll
Flammeovirga pectinis
Pathway
fll03420
Nucleotide excision repair
fll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI427_03795
03430 Mismatch repair
EI427_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fll03400
]
EI427_03795
Enzymes [BR:
fll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI427_03795
DNA repair and recombination proteins [BR:
fll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI427_03795
MMR (mismatch excision repair)
Other MMR factors
EI427_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZQ61375
UniProt:
A0A3Q9FNT0
LinkDB
All DBs
Position
1:complement(908166..910406)
Genome browser
AA seq
746 aa
AA seq
DB search
MDYLEGLNPPQREAVVNMEGPMMIIAGAGSGKTRVLTYKIAHLIANGIEPFNILSLTFTN
KASREMKERIVDVVGDEAKNLWMGTFHSVFAKILRFEADKLGYQSNFTIYDSEDAKSVIK
GVVKDYKLDDKLYKPNVVLSRISSAKNNLISWRSYEANNDMRLEDEAQGRPKIFEIYKEY
AIRCFRANAMDFDDLLFNTNVLFHQHLDVLNKYQHKFKFVMIDEFQDTNISQYYITRKLA
AKNRNICVVGDDAQSIYAFRGANIQNILNFEKDYPELKVIKLEQNYRSTQTIVEAANSVI
KHNKNQLEKSTFTQNGIGDRIEVIRSGSDLDEAKAVAQSIQTAIMRDRINPQDIAILYRT
NSQSRALEEALVKLSIKAQIFGGLSFYQRKEIKDMIAYLKFVTNPKDEEAFKRVINYPKR
GIGPTTVNNLFVKAAENKLGIWDVVSNIRRFFGGRIATQVENFANMIKVFQMQTEQKNAF
EVASFIAKGSGILRELYEDKSPEGKNRYDNLQELLNGIQGFADDPSKEDKKLGTYLEEIS
LITSSEKEDMSDAITLMTIHMSKGLEFDYCYIVGMEENLFPSQMMLETREDLEEERRLFY
VAITRAKIKVFLTYALQRYRFGKQISCEPSRFIDEIAPQYISMKRNSISDDLGPGNTPGF
SNYRSLRQAPSNFIKKAVKPKDDRPFVPSKAEDLSVGHIVRHMKFGDGKVVKISEEGLDK
RADISFEEVGKKTLILTFAKLMIIED
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggattatttagaaggattaaacccacctcagcgtgaagctgtagtaaatatggaaggc
cctatgatgattattgcaggtgccggctctggaaaaacaagagttttaacgtataaaatt
gctcacctgatagcaaatggtatcgaaccgtttaatattttgtcgcttacatttacaaat
aaggcttctagagaaatgaaggagcgtattgttgatgttgttggtgatgaagcaaaaaac
ctttggatgggtacttttcactctgtttttgctaaaattttacgctttgaagctgataaa
ttaggctaccaatccaattttacaatttatgattcagaagatgctaaatctgtaatcaaa
ggtgtggttaaagattacaagttagacgataaactatacaagccaaatgtggttttaagt
agaatatcatcagcaaaaaataatcttatctcttggcgttcttatgaggcaaataacgat
atgcgtcttgaagatgaagcacaagggcgtcctaaaatatttgaaatctataaagaatat
gcaattcgctgttttagagctaatgctatggattttgatgatctcctttttaatacaaat
gtacttttccatcagcaccttgatgtattaaataaatatcagcacaagtttaaatttgtg
atgattgacgagtttcaagataccaacatctctcaatactatattacgcgtaaacttgct
gcaaaaaatagaaatatttgtgttgttggtgatgatgcacaatctatatatgcttttcgt
ggtgctaatattcagaatattctaaattttgaaaaagattaccctgaattaaaagtaatt
aaactagagcagaattatcgttctacgcagactattgttgaagctgccaactcggtaatt
aaacacaataaaaaccaactcgaaaaaagtacttttacccaaaatggaattggggacaga
atagaagttatacgttcgggatctgatttagatgaggctaaagctgttgcacaaagtatt
cagacagcaataatgagggatcgtatcaatcctcaagatattgctattttataccgtacc
aactctcagtctagagcattagaagaagcccttgttaagctttctattaaagctcaaata
tttggtggactatctttctaccaaagaaaagaaattaaggatatgattgcttacttaaag
tttgtaaccaatcctaaagatgaagaggcctttaaacgtgttatcaactatcctaaacga
gggattggaccaactactgtcaataatttatttgttaaagcggcagaaaacaaacttgga
atctgggacgttgtctctaatataagacgcttctttggtggtagaattgccactcaagta
gaaaactttgccaacatgatcaaggttttccaaatgcaaacggaacaaaagaatgccttt
gaagtagcttcatttattgcgaagggttctggtattctccgagaattatacgaagacaaa
tcacctgaaggaaaaaataggtacgataaccttcaagaactccttaatggtattcaaggt
tttgctgatgacccgtcaaaagaagataaaaaactaggaacctatttagaagaaatttca
ttaattacatcttcagaaaaagaagatatgagcgatgcaattaccctaatgactattcat
atgtctaaaggtcttgagtttgattactgttacattgttggtatggaagagaatttattc
ccttctcaaatgatgttagaaacaagagaagatttagaagaagaaagaaggttattttat
gttgccataacacgtgctaaaatcaaagtatttttaacgtacgctttacaacgttataga
tttggtaaacaaatttcttgcgaaccaagtagatttattgatgagattgctcctcaatat
atcagcatgaaacgaaattctattagtgatgatcttggcccgggtaacacacctggattc
tctaattaccgttctttacgtcaggcgccatctaattttattaagaaagcagtaaaacct
aaagatgacagaccttttgttccctcaaaggcagaagatttatctgttggacatattgtt
aggcacatgaaatttggagatggcaaagtagttaagatttctgaagaagggcttgataaa
agagctgatatatcgttcgaagaagtaggcaaaaaaacattaatattaacttttgcaaag
ttgatgatcatagaagattaa
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