Flammeovirga pectinis: EI427_07285
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Entry
EI427_07285 CDS
T05771
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fll
Flammeovirga pectinis
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fll03032
]
EI427_07285 (topA)
03400 DNA repair and recombination proteins [BR:
fll03400
]
EI427_07285 (topA)
Enzymes [BR:
fll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EI427_07285 (topA)
DNA replication proteins [BR:
fll03032
]
Prokaryotic type
DNA Topoisomerases
EI427_07285 (topA)
DNA repair and recombination proteins [BR:
fll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EI427_07285 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZQ62048
UniProt:
A0A3S9P1H9
LinkDB
All DBs
Position
1:1821973..1824408
Genome browser
AA seq
811 aa
AA seq
DB search
MTKNLLIVESPAKAKTIEKYLGEGYTVRSSYGHVRDLKKGNDAIDVDHDFIPHYEVSPDK
KDVIRELKKLSKDAEMVWLATDDDREGEAISWHLKETLKLKDNDTKRIVFREITKSAIQS
AIKHPRTIDYDLVNAQQARRILDRLVGFELSPVLWKKIQRGLSAGRVQSVAARLVVERER
EVEAFNAKDFFKVIATFELDNNKFLEAELSTKFKTKEEANSFLNDCLGADFSISDIKTRP
GKKTPAPPFTTSTLQQEASRKLGYSVASTMSIAQKLYEAGHITYMRTDSLNLSNDAIQSA
TEEISRVYGKEFAHERHFKTTNKGAQEAHEAIRPTNFKNHKLELSDNREARLYDLIWKRA
VASQMADAKLERTTAEITTQKRAEKFVAKGEVIIFEGFLKAYIESNDDEIDEDEDTKGML
PPLSIGQGMPLDQMNATQRFSRPPARYTEASLVKTLEEKGIGRPSTYAPTISTIQRREYV
IKEARDGKERNYVKIVLKDNEVSERQLTETYGAEKSKLFPTNMGMVVNDFLVKHFPNVVD
YSFTANVEEQFDEIAHGNLEWQKMLGGFYKPFHDTVVDTEENADRAEAHAERELGIDPTT
GKKVITRLGRFGPIAQIGDQEDEEKKFASLRKGQYLETITLEDALELFKLPRTIGTYEDK
VVVAAIGRFGPYIRHDGKFVSLGKEYAPETVELDVAIELIEAKRKADAEKLIKTFEEEEN
LQLLNGRWGPYISYNKANIKIPKELKEKAKELTYEEVKKIIEEAPEPKTRGKKAAATKKE
PAKKKAATKKPAAKKAPVKKKATTRKTATKK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaacttattaattgtcgagtcacctgcaaaggcaaagactatcgaaaagtac
ctaggtgagggctacaccgtaagatcaagttatggccatgtacgtgacctaaagaaaggg
aacgatgcaattgatgttgaccacgatttcattccccactacgaagtctctcctgataaa
aaggatgttattagagagttgaagaaattatcaaaggatgctgaaatggtatggttagca
accgatgatgaccgcgaaggagaagctatatcttggcatcttaaggagacattaaaatta
aaagataacgatacaaaaagaattgtttttagagagattactaaatctgcaattcaatct
gcaatcaagcatcctagaactattgattatgatctagtaaatgcacaacaagcaagacgt
atcttagatagattagttggttttgaactttcgccagttttatggaagaaaattcaaaga
ggactttctgctggtcgtgtgcaaagtgtagcagcaaggttagtagttgaaagagaaaga
gaagttgaggcatttaatgctaaagacttctttaaagtaatagcaacgtttgaacttgat
aataataaattcttagaagcagaattaagtactaagtttaaaacaaaagaagaagcaaat
tcattcttaaatgattgtcttggagctgacttctctatttctgatattaaaacaaggcct
ggtaagaaaactccagcacctccttttactacttctacacttcaacaagaagcaagtaga
aaattaggctattcggttgcttctacgatgtcaattgctcagaaattatacgaagcgggc
catattacatatatgcgtaccgattcattaaatctatcaaatgatgcaattcaatcggct
acagaagaaatctctagagtctatgggaaagagtttgcacacgaaagacattttaaaaca
acaaataaaggagcacaagaagctcacgaggctatccgacctaccaactttaaaaatcat
aaattagagttgtctgataatcgtgaagcacgcttgtacgatctgatatggaaaagagca
gtagcctctcaaatggctgatgctaaattagaaagaactactgcagagattacaactcaa
aagagagctgaaaaatttgtagcaaaaggagaggtaattatcttcgaaggtttcttgaaa
gcatatattgaatctaatgatgatgaaatagatgaagacgaggacactaaaggaatgcta
ccaccattgtcaattggtcaaggtatgcctttagatcaaatgaatgcaactcaacgtttt
tctagacctccagcgcgttacacagaagctagtttagtgaagactttggaagaaaagggt
attggtagaccatctacatatgcaccaacaatttctacaatacaacgtagagagtatgta
attaaggaagctagagatggtaaggaaagaaattacgtgaaaattgttctaaaggataat
gaggttagcgaaagacagttgaccgaaacatatggagcagagaaaagtaaattattccct
acaaacatgggaatggttgtaaatgactttcttgtaaaacactttccaaatgttgtcgat
tattcttttactgcaaatgtagaagaacaatttgatgaaatcgcacatggtaatttagaa
tggcagaaaatgcttggtggtttttataaaccattccatgatactgttgttgatacagaa
gaaaatgcagatagagcggaagctcatgcagaaagagaactaggaattgaccctacaact
ggtaaaaaagtaattacacgtttaggtagatttggccctattgcacaaattggagaccaa
gaagacgaagaaaagaaattcgcttccttacgtaagggacaatatttagaaacaattacg
ttagaggatgctcttgaactattcaagcttccaagaacaattggaacatatgaagacaaa
gttgtagtagcagcaattggtcgttttggaccttatattagacatgatggaaagtttgtc
tctcttggcaaagaatacgctccagaaacagtcgaattagatgtggctattgaattaatt
gaagcaaaacgaaaagcggatgctgaaaaattaatcaagactttcgaagaagaagaaaat
ttacaacttctaaacggtaggtggggaccttatatttcttacaataaagctaatattaag
atcccaaaagagcttaaagaaaaagcaaaagaacttacttacgaagaagttaagaaaata
attgaagaggctcctgagccaaaaacaagaggtaaaaaagccgcggcaactaaaaaggaa
cctgctaaaaagaaagcagcgactaagaaacctgcagcaaaaaaagctcctgtaaagaaa
aaagccactacaagaaaaacggcaactaaaaaataa
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