Flammeovirga pectinis: EI427_08570
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Entry
EI427_08570 CDS
T05771
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fll
Flammeovirga pectinis
Pathway
fll00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EI427_08570 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fll01007
]
EI427_08570 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fll03016
]
EI427_08570 (lysS)
Enzymes [BR:
fll01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
EI427_08570 (lysS)
Amino acid related enzymes [BR:
fll01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EI427_08570 (lysS)
Transfer RNA biogenesis [BR:
fll03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EI427_08570 (lysS)
Prokaryotic type
Other AARSs
EI427_08570 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
NDUFB10
Rho_N
DUF4332
TOBE_3
Motif
Other DBs
NCBI-ProteinID:
AZQ62289
UniProt:
A0A3S9P269
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All DBs
Position
1:complement(2144776..2146530)
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AA seq
584 aa
AA seq
DB search
MQILSEQEVLRREKRQQLMDLGIDPYPAEKFDVNVSAADILKNFERRPNDYGTVSIAGRL
MSVRAMGKAAFIELQDATGRIQVYISRDDICPGEDKTLYNTVFKKLLDRGDFIGIEGFVF
TTQVGEISIHAKKLKVLSKALKPLPAVKVTKDEDGTETVHDAFTDPELRYRQRYVDLVVN
KGVKETFMKRTKIMNAMRNFFNDHGHLEVDTPVLQGIPGGAAASPFITHHNALDTPLYLR
IANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNPEFTAVEIYVAYKDYNWMMEFTEQC
LENVANAANGTSEVTVGDKEISFKAPYRRVTMADAILENTGKDINGKSVEELKAICDELE
IPHNETMGKGKLIDEIFGEKCEGNYIQPTFITDYPVEMSPLCKRHRDNPELTERFELMIN
GKEVANAYSELNDPVDQRERFEEQMKLMDAGDDEAMFIDQDFLRALEYGMPPTSGLGIGI
DRLVMLLTNNASIQEVLFFPQMRPEKWPEASSEAQWAEIGVGEDLIPVMHKIGFYMTSDL
ADKTSGKLMNDFIGMKKKLKLKQIPNPSKDVVEGWIAKAAEQNA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcttagcgaacaagaagtactccgaagagaaaagagacaacagttaatggat
cttggtattgatccatatccagccgaaaagtttgatgtaaatgtatcggcagcagatatt
cttaagaatttcgaacgccgtccaaacgattatggcactgtgtctatagcaggtcgtttg
atgagtgttcgtgcaatgggtaaggcagcttttattgagctacaagacgctacaggacga
attcaagtatatatctctagagacgatatctgtccaggagaagataaaactttatataat
acggtattcaaaaaattacttgatagaggtgattttattggtatcgaagggtttgttttc
actacacaggtaggggaaatctcaatccatgcaaagaagttgaaagtgctttctaaagca
ttaaaaccacttcctgcagtaaaagtaacaaaagacgaggacggaacagaaactgtacat
gatgcatttactgatcctgaattacgttaccgtcagcgttacgttgatttagtagtaaac
aaaggcgtgaaagaaacgttcatgaaaagaacgaaaatcatgaacgcaatgcgtaacttc
tttaacgatcacggacatttagaagtagatactccagtattacaaggtattcctggtggt
gcagcggcaagcccgtttattacacaccataatgctttagatactcctttatatttaaga
attgccaacgaattatacttaaaacgtttaattgttggtggatttgatggtgtatatgaa
ttctctcgtaacttcagaaacgaaggtatggatagaacacataacccagaatttacagca
gttgaaatctatgtagcctacaaagattacaactggatgatggaatttaccgaacagtgt
ttagaaaacgttgctaatgcagcaaatggtacttctgaagtaactgtaggtgataaagaa
atctcattcaaggctccgtaccgtcgtgttacaatggcagatgctattttagagaacaca
ggtaaagatatcaacggtaaaagtgttgaagaattaaaagccatctgtgatgagctagaa
attcctcataacgaaactatgggtaaaggtaaattaattgacgaaatctttggtgaaaag
tgtgagggtaactatatccaaccaactttcattacagattacccagttgagatgtctcca
ttatgtaagcgtcatagagataatccagaattaacggagcgttttgagttaatgattaat
ggtaaagaggttgctaacgcatattctgagcttaatgatcctgttgaccaacgtgaacgt
tttgaggagcaaatgaagttaatggatgcaggtgatgacgaggcaatgtttattgaccaa
gacttcttacgtgcattagaatacggaatgcctcctacatctggcttaggtattggtatt
gatcgccttgtaatgttattaacaaacaatgcatcaatccaagaagtattattcttccct
caaatgcgtccagaaaaatggccagaggcttcttcagaagcacaatgggcagaaattggc
gtaggtgaagacttaattccagtaatgcacaaaattggtttctacatgacttcagattta
gcagataaaacatctggtaaattgatgaatgatttcatcggaatgaaaaagaaattgaaa
ttaaagcaaattcctaacccatcgaaagatgttgtagaaggatggattgctaaagcagca
gagcaaaacgcataa
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