Flammeovirga pectinis: EI427_12125
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Entry
EI427_12125 CDS
T05771
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fll
Flammeovirga pectinis
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fll03009
]
EI427_12125 (rimO)
Enzymes [BR:
fll01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EI427_12125 (rimO)
Ribosome biogenesis [BR:
fll03009
]
Prokaryotic type
ribosomal protein modification factors
EI427_12125 (rimO)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZQ62958
UniProt:
A0A3Q9FPJ6
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All DBs
Position
1:complement(3037547..3038863)
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AA seq
438 aa
AA seq
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MKTKTLKENKVNIITLGCSKNIVDSEVIMTQLKGNGIEVVHEAEDDKFNIVLINTCGFIG
HAKTESIETILRYADAKKEGLIDKVYVSGCLSERYKEDLVNEIPEVDAFFGTREVPNLLR
ALNADYKKELLGERLLTTDKHFGYLKIAEGCDRPCSFCAIPLMRGKHVSTPIEDLVKQAE
DMVAKGVKEILLIAQDLTYYGLDIYKKRRLADLLRALSDVEGLEWIRLHYAYPTGFPMDV
IDVMKERDNIANYLDIPLQHGSTEMLKRMRRGTSREKQEQLINDIRAEIPNIAIRTTLIT
GHPGETEEEFEEMLDFVERMRFERVGVFTYSHEEDTHAGDDMEDTIPEDVKQERADEIMQ
IQEEISAELNQEKVGKVFRVLFDKIEGGYFVGRTEYDSPEVDNEVLVPVEEKNHVRLGDF
ANVKITSAEPFDLYGEIV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccaagacacttaaagaaaataaagtcaatattattacactcggttgttctaag
aacattgtagactctgaggtaattatgacacagttaaaaggtaatggcattgaagtagtt
catgaagctgaagatgataagtttaatatagtattaatcaacacttgtggatttattggg
catgctaaaacggaatctattgaaacgattcttcgttatgcagatgctaaaaaagaaggt
ttaattgataaagtatatgtttctggttgtttatcagaaagatataaagaagatttagta
aacgagattcctgaagttgatgcattctttggtactagagaagtgccaaacttgttgaga
gctttaaacgcagattataaaaaagaattattaggtgagcgtcttcttactacagacaaa
cactttggataccttaagattgcagaaggttgtgaccgcccttgttctttctgtgcaatt
cctttaatgagagggaaacatgtttctactccaatagaagatttggtaaaacaagctgaa
gacatggttgctaaaggggtaaaagagatacttcttattgcacaagacttaacatattat
ggtcttgatatttataaaaagagacgtttagcagatttacttagagctttatcagatgtt
gaaggtttagagtggatacgtttgcattatgcttacccaacgggcttcccaatggatgta
attgatgtaatgaaagaacgtgataatattgctaattaccttgatattccattacaacac
ggttctacagaaatgttgaaacgtatgcgtagaggtacatctagagaaaaacaagagcaa
ttgattaacgatatccgtgctgagattcctaacattgctatccgtacaactttaattact
ggtcacccaggtgaaacagaagaagagtttgaggaaatgttagactttgttgagcgtatg
cgttttgaacgtgttggtgtatttacttattctcatgaagaagatacacatgctggagat
gacatggaagatactattccagaagatgttaaacaggaaagagctgatgagattatgcaa
attcaggaagaaatttctgctgagcttaatcaagaaaaagtaggcaaagtattccgtgtt
ttatttgataaaattgaaggtggttattttgtaggaagaacagaatatgattctcctgag
gtagataacgaagtgttagtacctgtggaagaaaagaatcatgttcgtttaggtgatttt
gcaaatgtcaagattactagtgcagaaccatttgatttatatggcgagattgtttaa
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